Cereibacter sphaeroides 2.4.1: RSP_3615
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Entry
RSP_3615 CDS
T00284
Symbol
groEL
Name
(GenBank) thermosome subunit
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rsp
Cereibacter sphaeroides 2.4.1
Pathway
rsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RSP_3615 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsp03019
]
RSP_3615 (groEL)
03110 Chaperones and folding catalysts [BR:
rsp03110
]
RSP_3615 (groEL)
03029 Mitochondrial biogenesis [BR:
rsp03029
]
RSP_3615 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsp04147
]
RSP_3615 (groEL)
Enzymes [BR:
rsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RSP_3615 (groEL)
Messenger RNA biogenesis [BR:
rsp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RSP_3615 (groEL)
Chaperones and folding catalysts [BR:
rsp03110
]
Heat shock proteins
HSP60 / Chaperonin
RSP_3615 (groEL)
Mitochondrial biogenesis [BR:
rsp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RSP_3615 (groEL)
Exosome [BR:
rsp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RSP_3615 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
RSP_3615 (groEL)
Exosomal proteins of breast cancer cells
RSP_3615 (groEL)
Exosomal proteins of colorectal cancer cells
RSP_3615 (groEL)
Exosomal proteins of bladder cancer cells
RSP_3615 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ABA81224
UniProt:
Q3IW60
LinkDB
All DBs
Position
2:complement(723948..725576)
Genome browser
AA seq
542 aa
AA seq
DB search
MSAKEVRFGTDARGRMLKGINTLADTVKITLGPKGRNVILDTSYGAPRITKDGVTVAREI
ELSDRFENVGAQMVKEVASRTNEEAGDGTTTATVLAQAIAKEGMKAVAAGMNPMDLKRGI
DRAVAIVIAEIRSMSRPVGDSAEIAKVGALSANGEAAIGRQIADAMAKVGTAGVIKVEEN
KGLETETEVVEGMQFDRGYLSPYFITHAQKMVVELDDCAILLHEGKLTSLASMVPLLEAV
VQAEKQLLVVAEDVEGEALTTLVVNKLRGGLKVAAAKAPGFGDGRAAMLEDLAVLTGAHL
ISAELGTKLETVTLDMLGFAKKVVLTKDSTILIDSAGDKAAIASRIGQIRNQIEDTTSAY
NKEKLQERLARLAGGVAVIRVGGATEIEVKERRDRVEDTLNATRAAVQEGVVPGGGAALI
HAGKALAGLKGDNPDQDAGIKIIRRAIQAPLRQIADNAGIDGSVVAGKVIENDSATFGFD
AQLETYGDMLQAGIIDPTKVVRIALEDAASIAGLLITTEVIIAHKPERGERMSQMDEMGG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctaaagaagttcgattcggtaccgacgcccgcggccgtatgctgaaaggcatc
aacacgctggccgatacggtcaagatcaccctcggcccgaagggcagaaatgtcattctc
gacacgtcctatggcgcgccccgtatcaccaaggacggcgtgaccgtcgccagggagatc
gagttgtcggaccgtttcgagaacgtgggcgcccagatggtgaaggaagtggccagccgc
accaacgaggaggccggcgacggcacgaccacggcaacggttctggcacaggccattgcc
aaggaaggcatgaaggcggtcgcggccggcatgaatccgatggatctgaagcgggggatc
gaccgcgcggtggccatcgtcatagccgagatcaggtccatgtcccgaccggtcggagac
agcgccgaaattgcgaaggtcggggccctatcggccaatggcgaggcggcgatcggccgt
cagatcgccgatgcaatggcgaaggtcggcactgcgggggtgatcaaggtagaggagaat
aagggcctcgagaccgaaaccgaggtggtggaaggcatgcagttcgaccgcggttacctg
agcccctatttcatcactcatgcgcagaagatggtcgtggaattggacgactgcgccatc
ctgctccacgaaggcaagctgacctcgcttgcttcgatggtgccgttgctggaagcggtc
gttcaggcagaaaagcaacttctcgtcgtggccgaggacgtcgagggcgaggctctgacg
accctggtggtcaacaagctgcgcggcggtctcaaggttgcggcagcaaaggcacccggc
ttcggggatgggcgtgcggcgatgctggaggatcttgcagtcctgacgggcgcgcacctc
atctcggccgagctcgggacgaagctggaaaccgtcacgctggacatgctcggttttgcg
aagaaggttgtcctgacgaaggacagcaccatcctcatcgacagtgccggcgacaaggcg
gcgatcgcttcacgcatcggccagatccgcaaccagatcgaggatacgacgtcggcctac
aacaaggagaagttgcaggaacgtctggcgagactcgcgggcggagttgctgtcattcgg
gtcgggggtgccaccgaaatcgaagtgaaggagcgcagggacagggtggaggacaccctc
aacgccacccgcgccgcggtacaggagggcgtcgtgcccggcggcggggccgcactgatt
catgcgggcaaggctctggcgggcttgaagggcgacaatcccgatcaggatgcaggcatc
aagatcatccgccgcgcaatccaggcgccgctgcgccagatcgccgacaacgccgggatc
gacggatcggtcgtcgccggcaaggtcatcgagaacgacagcgcaacctttggcttcgat
gcgcagttggagacgtacggcgatatgctgcaggccggcatcatcgatccgaccaaggtc
gtgcggatagcattggaggacgccgcatcgatcgcaggcctgctgatcacgacggaggtg
atcatcgcgcataagccggaaaggggcgaacgaatgtcccagatggatgagatgggcggc
atgatgtga
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