Cereibacter sphaeroides 2.4.1: RSP_4284
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Entry
RSP_4284 CDS
T00284
Name
(GenBank) YD repeat protein
Organism
rsp
Cereibacter sphaeroides 2.4.1
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Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TcdB_toxin_midN
Motif
Other DBs
NCBI-ProteinID:
ABA81806
UniProt:
Q3HKD8
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All DBs
Position
E:complement(26034..31097)
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AA seq
1687 aa
AA seq
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MTSSQYQGSQAYNQSLQSNEYINRNTGSLVVSLPLVQLRGITDAIGLSLTLGYSAGASGQ
LGLPQGWGWGLPFVAAGQSLTVEGKTFVIDPSWTDSSGYQSGLRYLNDHGRLFQTVVPPQ
PVPGGGGTYGFMLRYDDGSISYFDATGKLIAHADLYGNMLRYAYTNPLGDVFQNSLASIT
DSFGQVVTFGYSGGTIVLTLPDGSSVTVAFSSQGVQHVTNQIGAVTAFSYASASGTTVVG
AITYPTGMTTTLAYTGLRYIDAGGNSGTRPAVQSMTRTGPGGAFLDRSDYSYGTASGGNT
YTGATAGYRMGTASDGLMDSNNTAYQYDVLEQRRDAGGALIAANRVFFNYLHCPLTEHAY
LVDANGHAQEAHRTSYTYDIVTDAHARSVNMNKPVTTVHSVYDAAGGTWSDNSQADVAYD
LYGKITSSSQYDLSSGRPRLTGQRTHSFLQVAWGGEMPQRTDYVDAVTGQTTRIDYGLTA
DQKSIAATTVSTQAAGAGSFAPYKTKTFQFDPRGCQTGWTLTWAQGYSGPEGSVASVGEQ
TSYSYDAASHQLTVDTTDANGHTRVAVFDMRLPGGPCLSQTKPGGARRSYAYDPLARLMQ
ETDPLGDVTTHAYTLAGNGGGGTNTSTVTQSNGYVLCTTYDAKGRAVLMMDNGDPTQSTP
SLSRTLRRVSFNALDLKASETDATEQTLTISYDALGRQIALADALGNQSTTIFDDAARTV
STSMNGDLRTVITRDGLGNTIQTDTHADSGSPQAGQVQRVTSAYDGFGQVVTETHFSITG
GNVVQNSVKTFAYTPDGNSEVVDFTGTPATAALQATRCTTTQRDLNGNPILVTRNVSYNG
AAQPLVVSETLTYDPVGNLIEIRNQAGQIERLSYTTDSALQSRTRYDGTQTTYAYDAAGQ
VLSETTNGQTRTFAYLSNGRIDHITDPSGTLRYAYSLDGTASSVTYPDGKTLSLTKDATS
RVVSMTLPDGTAASYSYNTLNQIIAQTMGGVTLSNTWGTANHANGVLLKQVLGGATAQTT
QFGYDGFGANDSVAVTDGAGIGVLSAAATRDGWRNLVSLTLASAVNTDPSVNVAKTMSYD
GLKQLVGITLAPSGGGSPTQVSYAYDGAANVLTRTRNGQQESFAYNALNQITSGAAAYDA
NGRMVRDVDGSTYGFDPLDRLTNVGMASGPSMSNSYGPQGALASVIDGSTEDRFYPLAGT
MVSVAANAQSGTPEWHGLMWAGQMPVARVSAGSVTAYAAASKSVYVHRTSASSNALAISA
YGTVTPQSALDRANSFNWNSQFTDPVSNLTYLRARWYNPETMRFLSLDPRITMNRYAYAM
GNPIANSDPLGQSWEEIVGLIAGAIVGIGATVLTGGVAGAAAAAVFGTECVAASIGAGAL
AGAVGSVAGDLTSAAISGQKITGARVGIDLLSGAVGGAVGAGLGGAAGRVAMRGALNAGW
SQAAITRVGLITSGAIGGLTGAAASAGVTSVAYQQPFFSTGNIVSMAVGFGAGAGGGILM
SGAYLGKINAKIIPVPIGEDELHLITPAVDTRGAVGENERLLVMAPQPEAETSANGFQRR
PGGYKYAMRLDFGEGEGEGRPLMAPGREESVDTIAGHGAGNTIFASVDVSGDGAPDFVRP
ISGRNFARYLVDEGWREREGPIKLMSCFGAFRNARVIADTLGRDVWAGYPELDRYSFTGW
VRFPAPH
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgtcgcaatatcagggctcgcaggcctataaccagtcgctgcaaagcaacgaa
tacatcaacaggaataccgggtcgctggtggtgtcgctgccgctggtgcagttgcgcggg
atcaccgacgccatcggcctgtcgctgacgctgggctattccgcgggggcgtcgggccag
ctgggcctgccgcagggctggggctgggggctgcccttcgtcgccgccgggcaatcgctg
acggtcgagggcaagacctttgtcattgaccccagctggaccgacagttcgggctatcaa
tccggcctgcgttatctgaacgaccatgggcgcctgttccagaccgtcgtcccgccgcag
cccgttccgggcggcggcgggacatacgggttcatgctgcgctatgacgacggatcgatc
agctatttcgacgccacgggcaagctgatcgcgcatgccgacctttacggcaacatgctg
cgctatgcctataccaacccgctgggcgacgtgttccagaacagcctagccagcatcacc
gacagtttcggccaggttgtcacgttcggctattccggcggcacgatcgtgctgaccctg
cccgacggatcgagcgtgaccgtggcgttttcgagccagggtgtacagcatgtcaccaac
cagatcggcgcggtcaccgccttcagctatgcctcggcctcgggcacgacggtcgtcggc
gcgatcacctatcccaccgggatgacaacgacgctggcctacaccggcctccgctacatc
gacgccggagggaattccggcacccgcccggccgtgcagtcgatgacccggaccggaccg
ggcggcgcgttcctggaccggagcgactacagctatggcaccgcatcgggcggcaatacc
tataccggggcaaccgcggggtaccggatgggaacggcctcggacgggctcatggacagc
aacaacaccgcctaccagtacgacgtgctggaacagcgccgcgacgcgggcggcgcactc
attgccgccaaccgggtgttcttcaactacctgcactgcccgctgacggagcatgcctat
ctggtggacgcaaacggccatgcgcaagaggcgcaccgcacctcctatacctacgacatc
gtcaccgacgcccatgcgcgaagcgtgaacatgaacaaaccggtgacgacggtgcacagc
gtctatgacgcggcgggcggcacgtggtccgacaattcgcaggcagatgtcgcctatgat
ctttatggaaagatcacgtcgagcagccagtacgacctgagcagcggcagaccccggctg
accggccagcggacgcacagctttctccaggtcgcgtggggaggcgagatgccgcagcga
accgactacgtcgatgcggtcaccggccagacgacgcggatcgactatgggctgacggcc
gaccagaaatccatcgccgccaccaccgtctctacccaggcggcgggcgcgggcagtttc
gccccctacaagaccaagaccttccagttcgatccccggggctgccagaccggctggacc
ctgacctgggcccagggctacagcggtcccgaggggtcggtcgcttcggtcggcgaacag
acctcctacagctacgatgccgcgtcgcatcagctgaccgtcgacacgactgacgccaac
ggccacacccgggtcgcggtcttcgacatgcgcctgccgggcggaccctgcctgagccag
accaaacccggcggcgcgcggcgcagctatgcctacgacccgctggcgcgcctgatgcag
gaaaccgacccgctgggcgatgtcacgacccatgcctacactctggccggaaacggtggc
ggcggcaccaacaccagcaccgtgacccagtccaacggctatgtcctctgcacgacctac
gatgcaaaggggcgcgccgtcctgatgatggacaatggcgatccaacccaatcgacgccc
agcctgtcgcgtaccctgcgccgcgtgagtttcaatgcgctggatctgaaggcgagcgag
accgacgccaccgaacagaccctgacgatcagctatgacgcgctgggacgtcagatcgcc
ctggccgatgccctgggcaatcagagcacgaccatcttcgatgacgcggcccgaacggtc
agcacctcgatgaacggcgatcttcgcacggtcatcacccgtgacgggctgggcaacacg
atccaaaccgacacccatgccgacagcggctcaccccaggcgggccaggtgcagcgcgtg
acctcggcctatgacggctttggccaagtggtgaccgaaacgcatttcagcatcaccggc
ggcaacgttgtgcagaattcggtcaagaccttcgcctatacgccggacggcaattccgaa
gttgtggatttcaccggcacccccgcgaccgccgcgttgcaggcgacgcgctgcaccacc
acgcagcgcgacctgaacggcaatccgatccttgtcacccgcaacgtcagctataacggc
gcggcgcagcccctcgttgtcagcgagacgctgacctatgatccggtcggcaacctgatc
gagatccggaaccaggccgggcagatcgaacggctgagctacacgaccgacagcgccctg
caaagccgcacccgctatgacggcacccagacgacctatgcctacgacgccgcaggccag
gtgctgagcgagaccacaaacgggcagacgcgcaccttcgcctatctttcgaatggcagg
atcgaccatatcaccgatccgagcggcaccttgcgctatgcctactctctggacggcacg
gcctcgtccgtgacctatcccgatggcaagacgctgtcgctgaccaaggacgccaccagc
cgggtggtgtcgatgaccctgcccgatggcaccgcggcaagctattcgtacaacaccctg
aaccagatcatcgcgcagaccatgggcggggtcacactgagcaacacctggggcacggcc
aaccacgccaacggcgtgttgttgaaacaggtgctgggcggcgcgacggcgcagaccacg
cagttcggctatgacggattcggggcaaacgacagcgtcgcggtcaccgacggcgcgggc
atcggcgtcctgagcgccgccgccacccgcgacggctggcggaacctggtgtcgctgacg
ctcgcctcggctgtgaacaccgatccttcggtgaacgtcgcgaagacgatgagctatgac
ggcctgaagcagctggtggggatcacgctggccccgtccggcggcgggtcgccgacccag
gtaagctatgcctacgatggcgccgccaatgtgctgacccgcacccggaacggccagcag
gagagctttgcctacaacgctctgaaccagatcacctcgggcgctgccgcctatgacgcc
aatggccgcatggtcagggacgtggacgggtcgacctatggcttcgacccgctcgaccgg
ctgaccaatgtcggcatggcctcggggccctcgatgtccaacagctatggtccgcagggc
gcgctggcctcggtgatcgacggcagcaccgaggacaggttctatccgctggccgggacc
atggtgagcgtggcggcgaatgcccagtcgggcacgccggaatggcacgggctcatgtgg
gcgggacagatgcccgtcgcgcgggtcagcgccggatcggtcaccgcctatgcggcggcg
tcgaaatcggtctatgtgcaccgcacctcggccagcagcaacgctctggccatctcggcc
tatggcacggtcacaccgcaatccgcgctcgaccgcgccaacagcttcaactggaattcg
cagttcaccgacccggtcagcaacctgacctatctcagggcgcgctggtacaacccggaa
accatgcgcttcttgtcgctcgatccgcgcatcaccatgaaccggtacgcctatgccatg
ggcaacccgatcgcgaactccgacccgctgggccagagctgggaagagatcgtggggctg
atcgccggggccatcgtcggcatcggcgcaaccgtgctgaccggcggggtcgcgggcgca
gccgcggcggcggtctttggcaccgaatgcgtggccgccagcatcggcgcgggcgcgctg
gcgggtgccgtgggctcggtcgcgggggatctgaccagtgccgcgatctcgggccagaag
atcaccggcgcgcgggtcggcatcgacctgctgagcggcgcggtggggggcgcggtcggc
gcgggcctgggcggcgcggcgggccgggtcgcgatgcgcggggcgctgaacgcgggctgg
tcgcaggcggcgatcacccgcgtcggcctcatcacctcgggcgccatcggcgggctgacc
ggggccgccgcctcggccggggtcacctcggtcgcctatcagcagccgttcttctcgacc
gggaacatcgtcagcatggcggtgggctttggcgccggcgcgggtggcgggatcctgatg
tcgggcgcctatctgggcaagataaacgccaagatcattccggtgcccatcggcgaggac
gaactgcacctgatcaccccggcggtcgacacgcgcggcgcggtgggcgagaacgagcgc
cttctggtgatggcgccgcagcccgaggccgaaaccagcgccaacggattccagaggcgc
ccgggcgggtacaaatacgcgatgcggctggatttcggcgagggcgaaggcgagggccgc
ccgctgatggcgccggggcgcgaggaatcggtggacaccatcgccgggcatggcgcgggc
aacaccatcttcgccagcgtcgatgtgagtggcgacggagcccccgatttcgtacgcccg
atctcgggccgcaactttgcccggtatctcgtggacgagggctggcgcgagcgtgagggg
ccgatcaagctcatgtcctgctttggcgccttccgcaatgcacgggtcatcgccgacacg
ttgggccgcgatgtctgggcgggttatcccgagctcgaccgctattccttcaccggctgg
gtccgctttccggcgccgcattag
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