Cereibacter sphaeroides ATCC 17025: Rsph17025_0359
Help
Entry
Rsph17025_0359 CDS
T00512
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
rsq
Cereibacter sphaeroides ATCC 17025
Pathway
rsq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Rsph17025_0359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsq03019
]
Rsph17025_0359
Enzymes [BR:
rsq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Rsph17025_0359
Messenger RNA biogenesis [BR:
rsq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Rsph17025_0359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABP69265
UniProt:
A4WPF1
LinkDB
All DBs
Position
complement(353146..354507)
Genome browser
AA seq
453 aa
AA seq
DB search
MPACRKMTMADFSTLGLSEKILQGLAKAQFTKATPIQVEAIPHVMQGRDLMGLAQTGTGK
TLAFGLPLLHRLLGVGHPPPPRTIRALILAPTRELVSQIAANLELFTKGTPVKVVTITGG
ASINRQTERLARGADIMVATPGRLIDLLDRNAVVLDHTGYLVLDEADQMLDMGFIHSLRK
IARFLPLKRQTLLFSATMPKLIEELAHTFLREPVRVQVAPPGKPVEKIAQGVHFIPQGDK
AKLLESYLLKHPGEQALVFGRTKHGSEKLMKLLVSWGFKAGSIHGNKSQNQRDRTLTEFR
DGTLDVLVATDVAARGIDIPGVRHVYNYDMPNVPENYVHRIGRTARAGAEGSAVAFVAPA
EMDEFRAVEKLLKQPIPVIGGAPWAADIVAAAPRPGQKPRQGGRPRAAGKPQGKPQGQAK
AHPRAGRASGVPGGQAAPKRPQRGPRRSEAARG
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcctgccgaaagatgaccatggctgatttcagcacgctcgggctgtccgagaag
attcttcagggccttgccaaggcccagttcaccaaggccaccccgatccaggtcgaggcg
atcccgcatgtcatgcaggggcgcgacctgatgggcctggcccagaccggcaccggcaag
acgctggccttcgggctgccgctcttgcaccgcctgctgggcgtcggccacccgccgccg
ccgcgcaccatccgcgcgctgatccttgcgcccacgcgcgaactggtgagccagatcgcc
gccaacctcgagctgttcaccaagggcacgccggtcaaggtcgtcaccatcaccggcggc
gcctcgatcaatcgccagaccgagcggctggcgcgcggggcggacatcatggtggccacg
ccgggccgcctcatcgacctgctcgaccgcaacgcggtggtgctcgatcatacgggctat
ctggtgctggacgaggccgaccagatgctcgacatgggcttcatccactccctgcggaag
atcgcgcgcttcctgccgctcaagcggcagacgctgctgttctcggccaccatgccgaag
ctgatcgaggagctggcccacaccttcctgcgcgagccggtccgcgtgcaggtggccccg
cccggcaagccggtcgagaagatcgcgcagggcgtgcacttcatcccgcagggtgacaag
gccaagctgctggagagctacctgctcaagcatccgggcgagcaggcgctggtcttcggc
cgcaccaagcacggctcggaaaagctgatgaagctgctggtcagctggggcttcaaggcg
ggctcgatccacggcaacaagagccagaaccagcgtgaccgcaccctgaccgagttccgc
gacggcacgctcgacgtgctggtggccaccgatgtggcggcccgcggcatcgacattccg
ggcgtgcgccacgtctacaactacgacatgccgaacgtgcccgagaactacgtccaccgg
atcggccgcaccgcccgcgccggcgccgagggcagcgccgttgccttcgtggccccggcc
gagatggatgagttccgcgcggtcgagaagctgctgaagcagccgatcccggtcattggt
ggcgcgccctgggcggccgacatcgtggccgccgcaccccgtccggggcagaagccgcgg
cagggcggccgtcccagggccgccggcaagccgcagggcaagccgcagggtcaggcgaag
gcgcatccgcgggccggacgtgcctcgggcgtgcccggtggacaggcggcgcccaagcgt
ccccaacgcggtccgcgtcgcagcgaagccgctcgcggctga
DBGET
integrated database retrieval system
