Cereibacter sphaeroides ATCC 17025: Rsph17025_0503
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Entry
Rsph17025_0503 CDS
T00512
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rsq
Cereibacter sphaeroides ATCC 17025
Pathway
rsq03030
DNA replication
rsq03430
Mismatch repair
rsq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rsph17025_0503
03430 Mismatch repair
Rsph17025_0503
03440 Homologous recombination
Rsph17025_0503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsq03032
]
Rsph17025_0503
03400 DNA repair and recombination proteins [BR:
rsq03400
]
Rsph17025_0503
Enzymes [BR:
rsq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rsph17025_0503
DNA replication proteins [BR:
rsq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rsph17025_0503
DNA repair and recombination proteins [BR:
rsq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rsph17025_0503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
DEDDh_C
RNase_H_2
PAS
Motif
Other DBs
NCBI-ProteinID:
ABP69409
UniProt:
A4WPU5
LinkDB
All DBs
Position
complement(500740..502827)
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AA seq
695 aa
AA seq
DB search
MLDRLNLRVRILLFFAALAVGANVAVSIGLFLAYRRLSAPELLPAFQQVGLVAGLAILGL
VTWIWYLFDANVALPIIRLASKLRARAHAAVDGAIEEPTARYLGDLEPAASATALTLAET
RNALAESVARETSRLSSEKARLEALLSDVPVGVLLCSGDHQLVFYNGPATDLMNTAGAPG
LDRNLFDYLRDGPIRHAHQRLVEAGDPDAASDILCTTVVGARVLAARMRLIGGETTKPGY
VLTLRDVTSALASYARREALLAEVFDRVRRPAANLQTLFEVLPPGTCPPPDVERALRQEV
GGLAAAITDLGARHDESRHDGWPLSITRASDLLDGLRARMEQAGLSAEIGEAPLLLRCNG
FEVIGLVATLAARVAARRTGNHFRVTLTEDGTEAMLRLVWQGAPLPVGLLEDWLGEPLEP
GVPEVTGRTVLSTHTTEIWPEPAAPGENALCLPLRAARRAGRRPRPIPRAVVYDFELLSK
ARNEKVAEARLEDLTYVVFDTETTGLMPSQDEIVQIAAVRIVNGRRVEAEVFDTLVNPRR
PIPPSSTEVHGITDAMVADAPDMTEVGRQFHKFAEGAVLVAHNAPFDMEFLRRAELLIDR
RFDNPILDTVLLSAVLFGQTEVHSLDALAHRLGITIPEEARHTAIGDTVATADAFLKLLP
MLQGRGFETFGAVLSEVRRHGRLLKDLNEANLTDA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatcgcctcaacctgcgcgtgcggatcctgctcttcttcgctgcgctggcagtg
ggggcgaatgtggcggtgtcgatcggcctgttcctcgcctatcggcgcctcagcgccccc
gagctgctgcctgccttccagcaggtcggccttgtggccgggcttgcgatcctgggcctc
gtcacctggatctggtatctgttcgatgccaatgtggcgctgccgatcatccggctcgcc
tcgaagctgcgggcacgggcccatgccgccgtcgatggcgcgatcgaagagccgacggcc
cgctacctcggcgatctcgagcccgcggcttcggccacggccctgacgctggccgagacg
cggaacgccctggccgagtccgtcgcgcgcgagacgtcgcgcctatcgtccgagaaggcc
cggctcgaggcgctgctgtccgatgtgccggtgggggtgctgctctgttcgggcgaccac
cagctcgtgttctataacggaccggcgaccgacctgatgaacacggccggcgcgccgggc
ctcgaccgcaatctcttcgactatctgcgcgacgggccgatccgccacgcccaccagcgg
ctcgtcgaggcgggcgacccggatgcggcctcggacatcctctgcacgacggtagtcggg
gcgcgggtgctggccgcccggatgcggctgatcgggggcgagaccacgaagcccggctat
gttctcacgctgcgcgacgtcacctcggcgcttgcgtcctacgcgcgtcgcgaggcgctg
ctggccgaggtgttcgaccgggtgcggcggccggcggccaacctccagacgctgttcgag
gtgcttccgcccggcacctgcccgccgccggatgtcgagcgggcgctgcggcaggaagtc
ggcggtctcgccgccgcgatcaccgacctcggcgcccggcacgacgagagccggcacgac
ggctggccgctgtcgatcacgcgcgcctcggatctgctcgacgggctgagggcgcggatg
gaacaggcgggcctttcggccgagatcggcgaagcgccgcttcttttgcgctgcaacggg
ttcgaggtgatcggtctggtggcgaccctggccgcccgcgtcgcggcccgccgcaccggc
aaccacttccgcgtgaccctgaccgaggacggaaccgaggccatgctgcggctggtctgg
cagggcgctccgctgcccgtcggcctgctcgaggactggctgggcgagccgctcgaaccg
ggtgtgcccgaggtgacgggccgcaccgtgctttccacccacacgaccgagatctggccc
gaacctgcggctccgggagagaatgcgctctgcctgcccttgcgcgccgcccgccgtgcc
ggccgccgcccgcgtccgatcccgcgcgccgtggtctatgatttcgagctgctctcgaag
gcccgcaacgagaaggtggccgaggcgcggctcgaggatctgacctatgtggtcttcgac
accgagaccaccggcctcatgccctcgcaggatgagatcgtgcagatcgccgccgtccgc
atcgtgaacggccgccgcgtcgaggccgaggtgttcgacacgctggtcaatccgcgccgg
ccgattccgccttcgtccaccgaggtccacgggatcacggatgcgatggtggccgacgcg
ccggacatgaccgaggtcgggcggcagttccacaagttcgccgaaggggcggtgctcgtc
gcccacaatgcgcccttcgacatggagttcctccgccgggccgagctgctgatcgaccgc
cgcttcgacaatccgatcctcgacacggtgctcctgtcggcggttctcttcgggcagacc
gaggtgcacagcctcgatgcgctggcgcaccggctggggatcaccatcccggaagaggcg
cgccacacggccatcggcgacacggtcgcgacggccgacgccttcctgaagctgctgccg
atgctgcagggccggggcttcgagaccttcggcgccgtgctctccgaggtgcgccgccac
ggacggctgctcaaggatctgaacgaggccaatctgaccgacgcctga
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