Cereibacter sphaeroides ATCC 17025: Rsph17025_1845
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Entry
Rsph17025_1845 CDS
T00512
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
rsq
Cereibacter sphaeroides ATCC 17025
Pathway
rsq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rsq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Rsph17025_1845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsq03400
]
Rsph17025_1845
DNA repair and recombination proteins [BR:
rsq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Rsph17025_1845
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Rsph17025_1845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
BCA_ABC_TP_C
AAA_25
DnaJ_CXXCXGXG
nSTAND1
ATPase
nSTAND3
AAA_23
AAA_21
DUF4350
Motif
Other DBs
NCBI-ProteinID:
ABP70736
UniProt:
A4WTM2
LinkDB
All DBs
Position
complement(1883873..1886731)
Genome browser
AA seq
952 aa
AA seq
DB search
MAEQKFISVRGAREHNLKGIDIDIPRDQLVVITGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLDMMGKPDVDHISGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLWARVGT
PYSPATGLPIAAQQVQDMVDAVMAMPEGTRGYLLAPIVRDRKGEYKKEFLELRKQGFQRV
KVNGTFHELEEPPVLDKKFRHDIDVVVDRIVVREGIETRLADSFRTALNLADGIAIFESA
PAEGEPVRTTFSEKFACPVSGFTIPEIEPRLFSFNAPFGACPDCDGLGVELFFDERLVVP
DQGLTLKQGAIAPWAKSKSPYYTQTVEALARHYGFDPKKKWKDLPDKVREVFLRGSGEEE
ITFRYDEGGRIYQVSRSFEGVIPNMERRYRETDSAWVREEFERYQNNRPCHACGGYRLKP
EALAVKIGGLHIGQVVQMSIKEAFAWVETVPGSLTAQKNEIARAILKEIRERLGFLVNVG
LDYLSMSRAAGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNDRLLTTLKNL
RDQGNSVLVVEHDEDAIREADYVFDIGPGAGVHGGQVVAHGTPAEIAADPASLTGQYLSG
TRAIPVSAERRKGNGKTLTVVKASGNNLRDVTVDFPLGRFVCVTGVSGGGKSTLTIETLY
KTAAMRLNGARETPAPCETIKGFEHLDKVIDIDQRPIGRTPRSNPATYTGAFTPIRDWFA
GLPESKARGYQPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCETCKGHRYNRETL
EIRFKGKSIADVLEMTVEDAQEFFQAVPSIREKMDALMRVGLGYIKVGQQATTLSGGEAQ
RVKLSKELSRRATGRTLYILDEPTTGLHFEDVKKLLEVLHELVEQGNTVVVIEHNLDVVK
TADWIIDIGPEGGDGGGTVVAEGTPEEVAKVEASHTGRYLRDMLKPKRLAAE
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacagaagttcatctcggtgcgcggtgcgcgcgagcacaatctcaagggcatc
gacatcgacatcccgcgggatcagctggtggtgatcaccggcctctcgggttcgggcaag
tcgagcctcgccttcgacacgatctacgccgagggccagcgccgctatgtcgagagcctc
tcggcctatgcgcggcagttcctcgacatgatgggcaagccggacgtggaccatatctcg
ggcctgtcgccggccatctcgatcgagcagaagaccacgtcgaagaacccgcgctcgacc
gtggggaccgtgaccgagatctacgactacatgcgccttctctgggcgcgggtcggcaca
ccctattcgcccgccaccggcctgcccatcgcggcgcagcaggtgcaggacatggtggat
gcggtgatggcgatgccggaggggacgcgcggctacctgctcgcgccgatcgtccgcgac
cgcaagggcgagtacaagaaggaatttctcgagctgcgcaagcagggcttccagcgggtg
aaggtgaacggcaccttccacgagctggaagagccgccagtgctggacaagaagttccgc
cacgacatcgacgtggtggtggaccggatcgtggtgcgcgaggggatcgagacgcggctg
gccgacagcttccgcaccgcgctgaacctcgccgacgggatcgcgatcttcgagagcgcc
cccgccgagggcgagcccgtgcgcacgaccttttccgagaagttcgcctgcccggtctcg
ggcttcaccatccccgagatcgagccgcggctgttttccttcaacgcgcccttcggcgcc
tgcccggactgcgacgggctgggggtggagctgttcttcgacgagcgcctcgtggtgccc
gatcaggggctgacgctgaagcagggcgccattgcaccctgggccaagtcgaagtcgccc
tattacacccagaccgtcgaggcgctggcgcggcactacggattcgatccgaagaagaaa
tggaaggacctgcccgacaaggtgcgggaggtcttcctgcgcgggtcgggcgaggaggag
atcaccttccgctatgacgagggcgggcggatctatcaggtcagccgcagcttcgagggg
gtgatccccaacatggagcgacgctaccgcgagaccgactcggcctgggtgcgcgaagag
ttcgagcgctaccagaacaaccgcccctgccatgcctgcggcggctatcgcctgaagccc
gaggcgctggcggtgaagatcggcggcctgcacatcgggcaggtggtgcagatgtcgatc
aaggaggccttcgcctgggtcgagacggtgccgggcagcctgaccgcgcagaagaacgag
atcgcgcgcgcgatcctgaaggaaatcagagaacgtcttggtttccttgtcaatgtcggg
ctggactatctctcgatgagccgggccgcgggcaccctgtcgggcggggaaagccagcgg
atccggctggcgagccagatcggctcggggctgaccggggtgctctatgtgctcgacgaa
ccctcgatcgggctgcaccagcgcgacaacgaccggctgctgaccacgctgaagaacctg
cgcgatcagggcaattcggtgctggtggtggaacatgacgaggatgcgatccgcgaggcg
gattatgtcttcgacatcggccccggcgcgggcgtgcacggtgggcaggtggtggcgcat
ggcacgccggccgagatcgctgccgatccggcgagcctcaccggccagtatctgtccggc
acgcgcgcgatccccgtttcggccgagcggcggaagggcaacggcaagaccctgaccgtg
gtcaaggccagcggcaacaacctgcgcgacgtgacggtggactttccgctgggccggttc
gtctgcgtgacgggcgtctcggggggcgggaaatcgacgctgaccatcgagacgctctac
aagactgcggcgatgcggctgaacggggcgcgcgagacgccggcgccctgcgagacgatc
aaggggttcgagcatctcgacaaggtgatcgacatcgaccagcggccgatcgggcgcacg
ccacgctcgaacccggcgacctataccggcgccttcaccccgatccgcgactggttcgcg
ggcctgcccgagtccaaggcgcgcggctaccagccgggtcggttctcgttcaacgtcaag
ggcgggcgctgcgaggcctgtcagggcgacggtgtcatcaagatcgagatgcacttcctg
cccgacgtctatgtgacctgcgagacctgcaagggccaccgctacaaccgcgagacgctg
gaaatccgcttcaagggcaagagtatcgccgacgttcttgagatgacggtcgaggatgcg
caggagttcttccaggcggtgccctcgatccgcgagaagatggacgcgctgatgcgggtg
gggctgggctacatcaaggtgggccagcaggcgacgacgctctcgggcggcgaggcgcag
cgggtgaagctgtcgaaggagctgagccgccgggccacgggccgcacgctctacatcctc
gacgagccgacgaccgggctgcatttcgaggatgtgaagaagctgctcgaggtgctgcac
gagctggtcgagcagggcaacacggtcgtggtgatcgagcacaatctcgacgtggtgaag
accgccgactggatcatcgacatcggtcccgagggtggcgatggcggcgggacggtggtg
gcggaaggtacgccggaggaggtggcgaaggtcgaggcctcgcacaccgggcgctacctg
cgcgacatgctgaagccgaagcggctggcggcggaatag
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