Cereibacter sphaeroides ATCC 17025: Rsph17025_1988
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Entry
Rsph17025_1988 CDS
T00512
Name
(GenBank) beta-lactamase domain protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
rsq
Cereibacter sphaeroides ATCC 17025
Pathway
rsq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Rsph17025_1988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsq03019
]
Rsph17025_1988
Messenger RNA biogenesis [BR:
rsq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Rsph17025_1988
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Motif
Other DBs
NCBI-ProteinID:
ABP70879
UniProt:
A4WU15
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All DBs
Position
complement(2029925..2031598)
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AA seq
557 aa
AA seq
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MSANRLIYLPLGGAGEIGMNCYVYGYGPEGRERLIIVDLGVTFPDMETTPGVDLIMPDIS
WLEERQDRIEAIFITHAHEDHIGALGHLWPRLKAPVYARRFTGTIGRLKFEEHGLPVDRI
NIVGARPEVVEAGPFEVQFVPVSHSIPESSALVIDTPAGRIVHSGDFKLDRSPVVGEPWA
DETFRAIAAERPVKALMCDSTNVFSLHPGRSEATLADPLRALIAGARGMVVATTFASNVA
RLKTLAEAAAASNRSICLLGRAMRRMVQAAQESGVLSGFPQVVSPEEAAEIPRQNLMLIV
TGSQGERRAASAQLARGKYLGLEMKEGDLFLFSSKTIPGNERGVLRVVNAFSEMGVDVMD
DAGGLYHVSGHANRPDLEQVHTLLWPEVLVPMHGEHRHLREHSRIAAAKGITSDVITNGM
LIDLTRGLQVAEYIDTGRTYLDGNVLIGARDGVVRDRIRMALNGHVLTTVILDEQDEPLG
EAWVELMGLPERGRTGKALSETMEEELSDYLGRAGAKVMRDDDKLDEAIRRIVRQVSMEE
IGKKPEVTVVVSRLMEG
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgaaccggctgatctacctgccgctcggcggagcgggcgagatcggaatgaac
tgctatgtctatggctatggccccgaggggcgcgagcggctgatcatcgtcgatctgggc
gtgacctttcccgacatggagacgacgccgggcgtcgatctcatcatgccggacatctcc
tggctggaagagcgtcaggaccggatcgaggccatcttcatcacccacgcgcacgaggac
cacatcggcgcgctcggccatctctggccgcggctcaaggcgccggtctatgcccgccgc
ttcaccggcaccatcgggcggttgaagttcgaggaacatgggctgcccgttgaccgcatc
aacatcgtgggcgcgcgccccgaggtggtcgaggcgggccccttcgaggtgcagttcgtg
ccggtctcgcactcgatccccgaaagctcggcgctggtgatcgacacgcccgcgggccgc
atcgtccactcgggggatttcaagctcgaccgttcgcccgtggtgggcgagccctgggcc
gatgagaccttccgggcgatcgcggcggaacgtcccgtcaaggcgctgatgtgcgactcg
accaacgtcttctcgctgcatcccggccggtccgaggcgacgctcgccgatccgctgcgg
gcgctgatcgcgggtgcgcggggcatggtggtggcgaccaccttcgcctcgaacgtggca
cggctcaagacgctggccgaggccgcggcggcgtccaatcgctcgatctgccttctcggg
cgcgccatgcggcgcatggtgcaggcggcgcaggaaagcggcgtgctgtccggctttccc
caggtggtgagccccgaggaagcggccgagatcccgcggcagaacctgatgctgatcgtg
accggcagccagggcgagcggcgcgcggcctcggcccagcttgcgcgggggaaatatctc
gggcttgagatgaaggagggcgacctcttcctcttctcctccaagaccatccccggcaac
gaacgcggcgtgctgcgcgtcgtcaacgccttctccgagatgggcgtcgatgtcatggat
gatgcgggcgggctctaccatgtctcgggccacgcgaaccggccggatctcgagcaggtg
catacgctgctctggccggaggtgctggtgccgatgcatggcgagcaccggcacctgcgc
gagcattcccgcatcgcggcggccaaggggatcacctcggacgtgatcaccaacgggatg
ctgatcgacctgacgcgcgggttgcaggtggcggaatatatagacaccggccggacctac
ctcgacggcaacgtgctgatcggcgcacgcgacggcgtggtgcgcgaccggatccgcatg
gccctgaacggccatgtgctgacgaccgtgatcctcgacgagcaggacgagccgctgggc
gaggcctgggtggaactcatgggcctgcccgagcggggtcggaccggaaaggcgctgtcc
gagacgatggaggaggaactctccgactatctcggccgggcgggtgccaaggtcatgcgc
gacgacgacaagctcgacgaggcgatccggcggatcgttcggcaggtgtcgatggaagag
atcggcaagaagcccgaggtgacggtggtggtcagccgcctgatggaggggtga
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