Cereibacter sphaeroides ATCC 17025: Rsph17025_2217
Help
Entry
Rsph17025_2217 CDS
T00512
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rsq
Cereibacter sphaeroides ATCC 17025
Pathway
rsq00061
Fatty acid biosynthesis
rsq00071
Fatty acid degradation
rsq01100
Metabolic pathways
rsq01212
Fatty acid metabolism
rsq02024
Quorum sensing
rsq04146
Peroxisome
Module
rsq_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rsq00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Rsph17025_2217
00071 Fatty acid degradation
Rsph17025_2217
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Rsph17025_2217
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rsph17025_2217
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rsq01004
]
Rsph17025_2217
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsq04147
]
Rsph17025_2217
Enzymes [BR:
rsq01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Rsph17025_2217
Lipid biosynthesis proteins [BR:
rsq01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Rsph17025_2217
Exosome [BR:
rsq04147
]
Exosomal proteins
Exosomal proteins of breast milk
Rsph17025_2217
Exosomal proteins of breast cancer cells
Rsph17025_2217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ABP71107
UniProt:
A4WUP3
LinkDB
All DBs
Position
2250610..2252571
Genome browser
AA seq
653 aa
AA seq
DB search
MAETGDLVSIPALLARNASQFANQPAYREKEFGIWQVWTWAEAADEIRAIALGFMALGLK
RGDFVAVVGRNRPALYWSMVAAQMCGAVPVPLYQDAAADEMAYVLDHCGATFVVCGDQEQ
VDKVIEVQDRIHHIEQVVYVDKRGMRKYDHSRMNWLADVVAEGRAAHWRFDEELNHRIAE
LGYDSTCVMLYTSGTTGKPKGVVLSNRNIIETSKNSAEFDRLRPGDEILAYLPMAWVGDF
IFSVGQAMWTGFCVNCPESATTMMNDLREIGPTYFFAPPRVFEGQLTNVMIRMEDAGRIK
KAIFHHYMNVARRVGPDILDGKPVGMADRLAYFIGDKLVYGPLKNTLGFSRVRVGYTAGE
AIGPEIFDFYRSLGINLKQLYGQTEASVFITQQPDGQVRSDTVGVPSPGVEVRIAENGEV
FYRSPGTFVSYYKNPESTASTKDAEGWVATGDAGFFEEATGHLRIIDRAKDVGKMADGRL
FAPKYVENKLKFFPSILEAVVFGNGRPMCTAFVNIDLNAVGNWAERNNIAYSSYQELAAN
PAVYDMIRGHVEEVNASVAADPMLSGCQIHRFLILHKELDADDGEMTRTRKVRRKIIEEK
YHDLIAALYDGRTSIYTETEVTYEDGRKGAIRATLRIEEATTQPGPAQRMAAE
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaacgggggatctcgtctcgattccggcgctgttggcgcgcaacgcaagccag
tttgccaaccagcccgcctatcgcgagaaggaattcggcatctggcaggtctggacctgg
gccgaggccgccgacgagatccgcgccatcgcgctgggcttcatggcgctggggctgaag
cgcggcgacttcgtcgcggtggtcggacgcaaccgccccgcgctctactggtcgatggtg
gcggcgcagatgtgcggcgcggttccggtgccgctctatcaggacgcggcggccgacgag
atggcctatgtgctcgatcattgcggcgccaccttcgtcgtctgcggcgatcaggagcag
gtggacaaggtcatcgaggttcaggaccgcatccaccacatcgagcaggtggtctatgtc
gacaagcgcggcatgcggaaatacgaccattcccgcatgaactggctggccgacgtggtg
gccgagggccgcgccgcgcactggcgcttcgacgaggagctgaaccaccggatcgcggaa
ctcggctacgactcgacctgcgtgatgctctatacctcggggacgaccggcaagcccaag
ggcgtcgtcctgtcgaaccgcaacatcatcgagacctcgaagaactcggccgagttcgac
cggctgcgccccggcgacgagatcctggcctatctgccgatggcctgggtgggcgacttc
atcttctcggtgggccaggccatgtggacgggcttctgcgtgaactgccccgaaagcgcc
accaccatgatgaacgacctgcgcgagatcgggccgacctacttcttcgcgccgccccgc
gtgttcgagggccagctgaccaacgtgatgatccgcatggaggatgcgggccggatcaag
aaggcgatctttcaccactacatgaacgtggcccgccgcgtcggccccgacatcctcgac
ggcaagcccgtgggcatggccgaccggctggcctatttcattggcgacaagctggtctat
ggcccgctgaagaacacgctgggcttcagccgcgtgcgcgtgggctacacggcgggcgag
gcgatcgggcccgagatcttcgacttctaccgctcgctgggcatcaacctcaagcagctc
tacggccagacggaagcctcggtcttcatcacccagcagcccgacggacaggtgcgctcg
gacacggtgggcgtgccctcgccgggggtggaggtgcggatcgccgagaatggcgaggtc
ttctaccgctcgcccggcaccttcgtctcctactacaagaaccccgaaagcaccgcctcg
accaaggacgccgagggctgggtcgccaccggcgacgcgggcttcttcgaggaggcgacg
ggccacctgcgcatcatcgaccgcgccaaggacgtgggcaagatggccgacgggcggctc
ttcgcgccgaaatatgtcgagaacaagctgaagttcttcccctcgatcctcgaggcggtg
gtgttcggaaacggccggccgatgtgcaccgccttcgtcaacatcgacctgaacgccgtc
ggcaactgggccgagcgcaacaacatcgcctattcctcctatcaggagctggcggcgaac
ccggccgtctatgacatgatccgcggccatgtcgaggaggtgaacgcctcggtcgccgcc
gacccgatgctgtcgggctgccagatccaccgcttcctgatcctgcacaaggaactcgat
gccgacgacggcgagatgacccgcacccgcaaggtgcgccgcaagatcatcgaggagaaa
taccacgacctgatcgccgcgctctatgacgggcggaccagcatctacaccgagacagaa
gtcacctacgaggacggccgcaagggcgcgatccgcgccacgctgaggatcgaggaggcc
acgacgcaacccggccccgcgcagaggatggcagcggaatga
DBGET
integrated database retrieval system
