Cereibacter sphaeroides ATCC 17025: Rsph17025_2316
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Entry
Rsph17025_2316 CDS
T00512
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rsq
Cereibacter sphaeroides ATCC 17025
Brite
KEGG Orthology (KO) [BR:
rsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsq03032
]
Rsph17025_2316
03400 DNA repair and recombination proteins [BR:
rsq03400
]
Rsph17025_2316
Enzymes [BR:
rsq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Rsph17025_2316
DNA replication proteins [BR:
rsq03032
]
Prokaryotic type
DNA Topoisomerases
Rsph17025_2316
DNA repair and recombination proteins [BR:
rsq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Rsph17025_2316
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
zf-C4_Topoisom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ABP71205
UniProt:
A4WUZ1
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Position
complement(2359657..2362299)
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AA seq
880 aa
AA seq
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MAVVVVESPAKAKTINKYLGSDYTVLASYGHVRDLPAKDGSVDTEHEFAMTWEVAADSKK
HVRAIAEALKTDDTLILATDPDREGEAISWHLQEALASSLKKGKTVSRVTFNAITKAAVT
EAMKAPRQVDTALVEAYLARRALDYLVGFTLSPVLWRKLPGAKSAGRVQSVCLRLIVERE
MEIEAFRAREFWTVSAVLVTPRGQEFEARLTVLGGKKLDKFDLPTAEAAELAVQAVTSRP
LKVASVEAKPASRNPSAPFMTSTLQQEASRKFGMGAKQCMSAAQRLYEAGHITYMRTDGI
DMAPEAVMAARDEIKRRFGADYVPDSPRMYKNKAKNAQEAHECIRPTDMSASPEKLGLTD
ADQRKLYELIWKRTLASQMAAARLERTTVEIASPDGQVGLRATGQVVLFDGFLKVYEEGR
DDRGEGDEDEGRLPQIMANEAVDKKSITPEQHHTQPPPRYTEATLVKRMEELGIGRPSTY
ASIVSTIQDREYVRKDKNRLIPEDKGRLVTAFLANFFRKYVEYDFTADLEGELDDVSAGE
RNYKEVLARFWRDFSAAVAETADLRIGEVLDKLDDFLAPHLYPPRPDGSDPRICPTCGSG
RLHLKTARGGGAFIGCGNYPECRYTRPISVTGDEDNAISPDGKLLGHDEDGQPITLRSGR
FGPYVQRGEATAEVPKPPRASLPKGWAPDSVDLERARMLLNLPRLVGQHPEDGQPVEAAI
GRYGPYVKHGSTYANLPDVEDVFTIGMNRAVEVLAQKAAGRRGASAPAQPIKELGEHPDG
GVLAVMPGRYGPYVKWGKVNATLPKGVEPEAITLEEALALVAEKAGKAPKKKAPARKAAK
AEGEPKKAAKAEGEAKKAAAKKAAPKASGKKKTAPDTDAA
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcgtcgtcgtcgaaagcccggccaaggccaagactatcaacaaatacctgggc
tccgactatacggttctggcctcctacgggcatgtccgcgacctgccggccaaggatgga
tcggtcgataccgagcatgagtttgccatgacctgggaggttgcggccgactcgaagaaa
cacgtccgcgcgatcgccgaggcgctgaagaccgatgacacgctgatcctcgccaccgac
cccgaccgcgagggcgaggcgatctcgtggcacctgcaggaggcgctggcctcgtcgctg
aagaagggcaagaccgtcagccgggtgaccttcaacgcgatcaccaaggccgcggtgacc
gaggcgatgaaggcgccgcggcaggtcgatacggcgctggtcgaggcctatctcgcccgc
cgcgcgctggattatctggtgggcttcacgctgtccccggtgctctggcgcaagctgccg
ggggcgaaatcggcgggccgggtgcagtcggtctgcctgcggctgatcgtcgagcgcgag
atggagatcgaggccttccgcgcccgcgagttctggaccgtctcggccgtgctcgtcacc
ccgcgcgggcaggagttcgaggcgcgtctgaccgttctgggcggcaagaagctcgacaag
ttcgacctgcccacggccgaggccgcggaactggcggtgcaggccgtgacctcacggccc
ctcaaggtcgcctcggtcgaggccaagcccgccagccgcaacccgtccgcgcccttcatg
acctcgaccctgcagcaggaggccagccgcaagttcggcatgggcgcgaaacagtgcatg
tcggcggcgcaacggctctatgaggccggccacatcacctacatgcggacggacggcatc
gacatggcgcccgaggccgtcatggccgcgcgcgacgagatcaagcggcggttcggggcg
gactatgtccccgacagcccccgcatgtacaagaacaaggccaagaacgcgcaggaagcc
cacgagtgcatccggcccaccgacatgtcggcctcgcccgagaagctgggcctgaccgac
gccgaccagcgcaagctttacgaactgatctggaagcggacgctggccagccagatggcg
gccgcccggctggagcggaccacggtcgagatcgcaagcccggacgggcaggtggggctg
cgcgcgacggggcaggtcgtgctcttcgacggcttcctcaaggtctatgaggaaggccgc
gacgaccgcggcgagggcgacgaggacgagggccgcctgccgcagatcatggcaaacgag
gcggtggacaagaagtccatcacgcccgagcagcaccacacccagccgccgccgcgctat
accgaggccactctggtcaagcggatggaggaacttggcatcggccggccttcgacctat
gccagcatcgtctcgacgatccaggaccgggagtatgtgcggaaggacaagaaccggctg
attcccgaggacaaggggcggctggtgacagccttccttgcgaacttcttccgcaaatat
gtcgaatacgatttcaccgccgatctggaaggcgagcttgacgacgtctcggccggcgag
cggaactacaaggaagtgctggcgcggttctggcgcgatttctcggcggcggtggcggaa
acggccgatctgcgtatcggcgaggtgctcgacaagctcgacgatttcctcgcgccccat
ctctacccgccgcggcccgacgggtccgatccccggatctgcccgacctgcggctcgggg
cgtctgcatctgaagacggcgcggggcggcggggccttcatcggctgcgggaactacccg
gaatgtcgctacacgcggccgatctcggtcacgggcgatgaggacaacgcgatctcgccc
gatggcaagctccttggtcatgacgaggatggccagccgatcacgctgcgctcgggccgg
ttcggtccttacgtgcagaggggcgaggcgacggccgaggtgccgaagccgccgagggcc
agcctgcccaagggctgggcgccggactcggtcgatctcgagcgggcgcggatgctgctg
aacctgcctcggctggtcgggcagcaccccgaggacggtcagccggtcgaggctgcgatc
ggccgctacggaccttacgtcaagcacggctcgacctatgcgaatctgcccgatgtcgag
gacgtcttcaccatcggcatgaaccgcgccgtcgaggttctggcgcagaaggccgccggc
cggcgcggcgcctcggctccggcgcagccgatcaaggagttgggcgagcatcccgacggc
ggagttctggccgtgatgccggggcgttacgggccgtacgtcaagtggggcaaggtgaac
gcgaccctgccgaagggggtcgagcccgaggcgatcacccttgaggaggctcttgcgctg
gtggccgagaaggcgggcaaggcgccgaagaagaaggcacccgcccggaaggccgccaag
gccgagggagagccgaagaaggccgccaaggccgagggcgaggcgaagaaggccgcggcc
aagaaggcggccccgaaggcctctgggaagaaaaagacggcgccggacaccgacgccgcc
tga
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