Cereibacter sphaeroides ATCC 17025: Rsph17025_2541
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Entry
Rsph17025_2541 CDS
T00512
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
rsq
Cereibacter sphaeroides ATCC 17025
Pathway
rsq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rsq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Rsph17025_2541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsq03021
]
Rsph17025_2541
03400 DNA repair and recombination proteins [BR:
rsq03400
]
Rsph17025_2541
Enzymes [BR:
rsq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Rsph17025_2541
Transcription machinery [BR:
rsq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Rsph17025_2541
DNA repair and recombination proteins [BR:
rsq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Rsph17025_2541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
RPOC_hybrid
LisH_PAC1
DUF7567
Motif
Other DBs
NCBI-ProteinID:
ABP71429
UniProt:
A4WVL5
LinkDB
All DBs
Position
complement(2579147..2583394)
Genome browser
AA seq
1415 aa
AA seq
DB search
MNQELSTNPFNPVAPVKTFDEIKISLASPERILSWSYGEIKKPETINYRTFKPERDGLFC
ARIFGPIKDYECLCGKYKRMKYRGVVCEKCGVEVTLQKVRRERMGHIELAAPVAHIWFLK
SLPSRIGLMLDMTLRDLERILYFENYVVIEPGLTDLTYGQLMTEEEFLDAQDQYGADAFT
ANIGAEAIREMLSAIDLEQTAETLREELKEATGELKPKKIIKRLKIVESFLESGNRPEWM
ILTVLPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKR
MLQEAVDALFDNGRRGRVITGTNKRPLKSLSDMLKGKQGRFRQNLLGKRVDFSGRSVIVT
GPELKLHQCGLPKKMALELFKPFIYSRLEAKGLSSTVKQAKKLVEKERPEVWDILDEVIR
EHPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQ
LEARVLMMSTNNVLSPANGAPIIVPSQDMVLGLYYTTMERRGMKGEGMAFSSVEEVEHAL
AAGEVHLHATITARIKQIDDEGNEVVKRYQTTPGRLRLGNLLPLNAKAPFELVNRLLRKK
DVQNVIDTVYRYCGQKESVIFCDQIMGMGFREAFKAGISFGKDDMLIPDTKWPIVNEVRD
QVKEFEQQYMDGLITQGEKYNKVVDAWSKCSDKVAGEMMAEISAVRYDDAGAEKEPNSVY
MMSHSGARGSPAQMKQLGGMRGLMAKPNGEIIETPIISNFKEGLTVLEYFNSTHGARKGL
ADTALKTANSGYLTRRLVDVAQDCIVRSHDCGTENAITASAAVNDGEVVSPLSERVLGRV
AAEDILVPGTDEVVVARGELIDERRADLIDQANVALVRIRSPLTCEAEEGVCAMCYGRDL
ARGTLVNIGEAVGIIAAQSIGEPGTQLTMRTFHIGGIAQGGQQSFLEASQEGRIEFRNPN
LLENANGEQIVMGRNMQLAIIDEAGQERATHKLTYGAKVHVKDGQSVKRGTRLFEWDPYT
LPIIAEKGGVARFVDLVSGISVREDTDEATGMTQKIVSDWRSTPKGGDLKPEIIIMDPDT
GNPMRNEAGNPISYPMSVEAILSVEDGQTVRAGDVVARIPREGARTKDITGGLPRVAELF
EARRPKDHAIIAENDGYVRFGKDYKNKRRITIEPVDETLNSVEYMVPKGKHIPVQEGDFV
QKGDYIMDGNPAPHDILRIMGVEALANYMIDEVQEVYRLQGVKINDKHIEVIVRQMLQKY
EILDSGETTLLKGEHVDKAELDETNEKAIQHGMRPAHAEPILLGITKASLQTRSFISAAS
FQETTRVLTEASVQGKRDKLVGLKENVIVGRLIPAGTGGATSRVKKIAHDRDQTVIDARR
AEAESAAALAAPTDEVIDLGPEDSGLVETVESRKE
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggaactctcgaccaatccgttcaacccggttgcgccggtcaagaccttcgac
gagatcaagatctcgctcgcctcgccggaacggatcctctcgtggtcctacggcgagatc
aagaagcccgagaccatcaactaccggaccttcaagccggagcgggacggcctgttctgc
gcgcggatcttcgggccgatcaaggactacgagtgcctctgcggcaagtacaagcgcatg
aagtatcgcggcgtcgtctgcgagaagtgcggcgtggaagtgacgctccagaaggtgcgg
cgcgagcggatgggccatatcgagctcgccgctccggtcgcgcacatctggttcctgaag
tcgctgccgagccgcatcggcctcatgctcgacatgacgctgcgggatcttgagcgcatc
ctgtatttcgagaactacgtcgtcatcgaaccgggcctgaccgacctcacttacggccag
ctgatgaccgaggaagagttcctcgacgcgcaggaccagtacggcgccgacgccttcacc
gccaacatcggcgccgaggcgatccgcgagatgctgtcggccatcgacctcgagcagacc
gccgagacgctccgcgaggagttgaaggaggcgacgggggaactcaagccgaagaagatc
atcaagcggctgaagatcgttgaatccttcctcgagtcgggcaaccggccggagtggatg
atcctgaccgtgctgccggtgatcccgccggaactgcgcccgctggtcccgctggacggc
ggccggttcgccacgtccgacctcaacgacctctaccgtcgcgtgatcaaccggaacaac
cgcctcaagcggctgatcgagctgcgcgcgccggacatcatcgtgcgcaacgaaaagcgg
atgctgcaagaggcggttgacgcgctgttcgacaacggccgtcgcggccgcgtcatcacg
ggcaccaacaagcgcccgctgaagtcgctgtcggacatgctgaagggcaagcagggccgg
ttccgccagaacctgctcggcaagcgcgtggacttctcgggccgttcggtcatcgtgacc
ggccccgagctgaagctgcaccagtgcggcctgccgaagaagatggcgctcgaactgttc
aagccgttcatctactcgcggctggaggcgaaggggctttccagcaccgtgaagcaggcg
aagaagctggtcgagaaggagcgtccggaggtctgggacatcctcgacgaggtgatccgc
gaacatccggtgctgctgaaccgtgcgccgacgctgcaccgtctgggcatccaggcgttc
gagccgatcctgatcgaaggcaaggcgatccagcttcacccgctggtctgctcggccttc
aacgccgacttcgacggtgaccagatggccgtccacgttccgctttcgctggaagcccag
ctggaagcgcgcgtgctgatgatgtccacgaacaacgtgctgtcgcccgccaacggcgca
ccgatcatcgtgccgtcgcaggacatggtgctcgggctctattacaccacgatggagcgc
cgcggcatgaagggcgagggcatggccttctcgtccgtcgaagaggtcgaacatgccctt
gccgccggcgaggtgcacctgcacgcgaccatcaccgcccggatcaagcagatcgacgac
gagggcaacgaggtcgtcaagcgctaccagaccactcccggccgcctgcggctgggcaac
ctgctgccgctcaacgccaaggccccgttcgagctggtgaaccggctcctgcggaagaag
gacgtgcagaacgtcatcgacaccgtctaccgctactgcggccagaaggagtcggtgatc
ttctgcgaccagatcatgggcatgggcttccgcgaggcgttcaaggccggcatctcgttc
ggcaaggacgacatgctgatcccggacaccaagtggccgatcgtgaacgaggttcgcgat
caggtgaaggagttcgaacagcagtacatggacggcctgatcacacagggcgagaagtac
aacaaggtcgtcgatgcctggtccaaatgctcggacaaggtggcgggcgagatgatggcc
gaaatctcggcggtgcgctacgacgacgccggtgccgagaaagagccgaactcggtctat
atgatgtcccactccggcgcgcggggttcgccggcgcagatgaagcagctcggcgggatg
cgcggcctgatggccaagccgaacggcgaaatcatcgagacgccgatcatctcgaacttc
aaggaaggtctgaccgttcttgaatacttcaactcgacccacggcgcccggaagggtctg
gccgacaccgcgctcaagacggcgaactcgggctacctgacccgccgtctggtggacgtg
gcgcaggactgcatcgtgcgcagccacgactgcggcaccgagaacgcgatcaccgcctcg
gccgcggtgaatgatggcgaagtggtcagcccgctctccgagcgcgtgctgggccgtgtc
gcggccgaggacatcctggtccccggcactgacgaggtcgtggtcgcccgcggcgagctg
atcgacgagcgtcgcgccgatctgatcgaccaggcgaacgtggcgctggtgcgcatccgc
agcccgctgacctgcgaggccgaggaaggcgtctgcgccatgtgctacgggcgcgacctt
gcccgcggcacgctggtcaacatcggcgaggcggtgggcatcatcgccgcgcagtcgatc
ggtgaaccgggcacgcagctgacgatgcggaccttccacatcggcggcatcgcgcagggt
ggccagcagtcgttccttgaagcgagccaggaaggccggatcgagttccgcaacccgaac
ctgctcgagaacgccaacggcgaacagatcgtcatgggccgcaacatgcagctcgcgatc
atcgacgaggcggggcaggagcgggcgacgcacaagctgacctacggcgccaaggtccat
gtgaaggacggccagtcggtgaagcgcggcacgcggctcttcgaatgggacccctacacc
ctgccgatcatcgccgaaaagggcggtgtggcgcggttcgtggatctcgtctcggggatc
tcggtgcgcgaggataccgacgaagccaccggcatgacccagaagatcgtgtcggactgg
cgctcgaccccgaagggcggcgacctgaagcccgagatcatcatcatggaccccgacacg
ggcaatccgatgcggaacgaggcgggcaacccgatctcgtatccgatgtcggtggaggcc
atcctctcggtcgaggacggccagaccgtgcgggccggcgacgtggtggcgcgtatcccg
cgcgaaggtgcccggaccaaggacatcaccgggggtcttccccgcgtggcggaactgttc
gaggcccgtcgcccgaaggatcacgcgatcatcgccgagaacgacggctatgtgcgcttc
ggcaaggactacaagaacaagcgccgcatcacgatcgagccggtggacgagacgctgaac
tcggtcgagtacatggtgcccaagggcaagcacatcccggtgcaggaaggcgacttcgtg
cagaagggtgactacatcatggacggcaacccggctccgcacgacatcctgcggatcatg
ggggtcgaggcgctggcgaactacatgatcgacgaggtgcaggaggtctaccgactgcag
ggcgtgaagatcaacgacaagcacatcgaggtgatcgtgcggcagatgctgcagaaatac
gagatcctcgattcgggcgagaccacgctgctcaagggcgagcatgtggacaaggccgag
cttgacgagaccaacgagaaggcgatccagcacggcatgcgtccggctcatgccgaaccg
atcctgctcgggatcaccaaggcgtcgctgcagacccgcagcttcatctcggcggcctcg
ttccaggagacgacgcgcgtgctcaccgaagcctcggtgcagggcaagcgcgacaagctt
gtcggtctgaaggagaacgtgatcgtcggccggctgatcccggccgggacgggcggggcg
acctcgcgcgtcaagaagatcgcgcacgatcgcgaccagaccgtgatcgacgctcgccgc
gccgaagccgagtccgctgcggcgctcgccgcgcccacggacgaggtgatcgacctcggc
cccgaggattcgggtctggtggaaacggtggagagccgcaaggagtga
DBGET
integrated database retrieval system
