Cereibacter sphaeroides ATCC 17025: Rsph17025_2640
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Entry
Rsph17025_2640 CDS
T00512
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
rsq
Cereibacter sphaeroides ATCC 17025
Brite
KEGG Orthology (KO) [BR:
rsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsq03009
]
Rsph17025_2640
Enzymes [BR:
rsq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Rsph17025_2640
Ribosome biogenesis [BR:
rsq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Rsph17025_2640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRM5-TYW2_MTfase
MTS
Methyltransf_25
DUF3383
Motif
Other DBs
NCBI-ProteinID:
ABP71527
UniProt:
A4WVW3
LinkDB
All DBs
Position
complement(2679475..2680689)
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AA seq
404 aa
AA seq
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MIVTIERLGHLGDAIGQGVFVSGALPGERVEGEVHEGRIAAPRILTPSPDRVRPPCPHAR
SCGGCLLQHASDGFVERWKQEVVRSALAGQGLEAPFRPMAVSPPATRRRAVLSGRRTKGG
ALVGFHARQSGTIIPIPECKLLHPDLMQTIPALETLVRAAGSRSGELSLTVTRSLGGPDV
AVTGGKALDAPLRAELARIAEERSLARLTWEGETIALRVPPAQAFGAARVVPPAGAFLQA
TAEGEAALLAAVRDAIGEARTVTDLFAGVGTFALPLAAAAEVHAVEGDAAMTEALDRGWR
QAQGLKRVTVETRDLFRRPLEPDELRRAEAVVIDPPRAGAEAQCAALARARVPVIAFVSC
NPVTFARDAALLVRAGYRLDWVQVVDQFRWSAHVELAARLSLPA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgtcaccatcgagaggctgggtcatctgggcgatgcgatcggccagggtgtcttc
gtgtccggcgccctgccgggagagagggtcgagggcgaggttcacgagggccggatcgcc
gcgccgcgcatcctgacgccctcgccggaccgtgtgcgcccgccctgtccccatgcccgc
agctgcggcggctgcctgctgcaacatgcctcggacgggttcgtggagcggtggaagcag
gaggtcgtgcgctcggcgctggcggggcaggggcttgaggcgccgttccggccgatggcg
gtctcgccgcccgcgacgcgccggcgcgcggtcctctcggggcggcggacgaagggcggg
gcgctggtggggttccacgcgcgccagtcaggcacgatcatcccgatccccgagtgcaag
ctgcttcatcccgacctgatgcagacgatccccgcactcgagacgctggtccgggccgcc
ggctcccgctcgggcgagctgtcgctgaccgtgacgcgcagtctgggggggcccgacgtg
gcggtgacgggcggcaaggcgctcgacgcgccgcttcgcgccgagcttgcccggattgcc
gaagagcggtcgcttgcgcggctgacgtgggagggtgagacgatcgcgctgcgcgttccg
cccgcgcaggcgttcggcgcggcccgcgtggtgccgccggcgggcgccttcctgcaggcg
acggccgagggcgaggccgcgcttcttgccgccgtgcgcgatgccattggcgaagcgcga
acggtgaccgacctctttgccggcgtgggcacctttgcgctgccgctggccgccgcggcc
gaagtccatgccgtcgagggggatgcggccatgaccgaggcgctcgatcgcggctggagg
caggcgcagggcctgaagcgggtgacggtcgagacgcgcgacctgttccgccgcccgctc
gagccggacgagcttcgccgggccgaggcggtggtgatcgacccgccccgcgccggggcc
gaggcgcagtgcgcggcgctggcgcgcgcgcgggtgccggtgatcgcctttgtctcgtgc
aacccggtgaccttcgcccgggatgcggcgcttctcgtgcgggcgggctaccggctcgac
tgggtgcaggtggtggatcagttccggtggtcggcgcatgtggagcttgccgcccggctc
agcctgccagcctga
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