Cereibacter sphaeroides ATCC 17025: Rsph17025_2968
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Entry
Rsph17025_2968 CDS
T00512
Name
(GenBank) Topoisomerase IB-like protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rsq
Cereibacter sphaeroides ATCC 17025
Brite
KEGG Orthology (KO) [BR:
rsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsq03032
]
Rsph17025_2968
03400 DNA repair and recombination proteins [BR:
rsq03400
]
Rsph17025_2968
Enzymes [BR:
rsq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Rsph17025_2968
DNA replication proteins [BR:
rsq03032
]
Prokaryotic type
DNA Topoisomerases
Rsph17025_2968
DNA repair and recombination proteins [BR:
rsq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Rsph17025_2968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
RE_XamI
Motif
Other DBs
NCBI-ProteinID:
ABP71854
UniProt:
A4WWU0
LinkDB
All DBs
Position
complement(3031386..3032420)
Genome browser
AA seq
344 aa
AA seq
DB search
MKDGCVLVEMADGTQASVPRGLVYVTDSAPGITRRRCGRGFVYRGPDGRILGREERARIL
KLGVPPAYEKVWICPLENGHLQATGFDARGRKQYRYHPDWGSWRSQAKYALLPAFGEALP
RLRRRVSRDLKAEAGELAFSLAALTMLIDRTWLRVGSSAYAEENRTFGATTLLSRHVKLR
EGEVRLDFRAKGGKRVRQVLKDRRLHRILQEIEDLPGRNLFTWIDEEGQVRRVASHHVND
YLVEATELPGASAKTFRTWGGSLAAFGLARATEGRLTVKMMAEAAAERLHNTPTISRTSY
IHPRILGLADLKPEDRRDQLAAMEPADLAELRREERIMLGFLRS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggacggctgcgttctcgtcgaaatggcggacggcacccaggcatcggtgccccgc
ggtctcgtctatgtcaccgactccgcgcccggcatcacgcggcgccgctgcggacggggg
tttgtctatcgcggccccgacggtcggattctcgggcgcgaagagcgggcacggatcctg
aagctgggggtgccgcccgcctacgagaaggtctggatctgcccgctcgagaacgggcac
cttcaggcgaccgggttcgacgcgcgcggccgcaagcagtatcgctaccacccggactgg
ggaagctggcgatcccaggcaaaatacgccctgctgcccgccttcggcgaggcgctgcca
cggctgcgccgccgcgtgtcgcgcgacctcaaggccgaggccggcgagcttgccttttcg
ctggccgccctcaccatgctgatcgaccggacctggctgcgcgtcggaagttcggcctac
gccgaagagaaccgcaccttcggcgccaccacgctcctctcccgccatgtgaagcttcgc
gagggcgaggttcgcctcgacttccgcgccaaggggggcaagcgcgtgcggcaggtgctg
aaggaccgccgcctgcaccgcatcctgcaggagatcgaggatctccccggccgcaacctc
ttcacctggatcgacgaggagggtcaggtccgccgcgtggcctcgcaccatgtgaacgac
tatctggtcgaagccaccgagcttcccggcgcgagcgccaagaccttccgcacctggggc
gggtcgctcgcggccttcggtctggcccgcgccacagaagggcggctgaccgtgaagatg
atggccgaggccgcagccgagcggctgcacaacacgcccacgatcagccgcacctcctac
atccatccccgcattctcggcctcgcggacctgaagcccgaggacaggcgggaccagctc
gccgcgatggagccggccgatctggccgaactgcgccgcgaagagcggatcatgctgggc
ttcctgcgctcctga
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