Cereibacter sphaeroides ATCC 17025: Rsph17025_3127
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Entry
Rsph17025_3127 CDS
T00512
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rsq
Cereibacter sphaeroides ATCC 17025
Pathway
rsq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rsq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rsph17025_3127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsq03400
]
Rsph17025_3127
Enzymes [BR:
rsq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Rsph17025_3127
DNA repair and recombination proteins [BR:
rsq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Rsph17025_3127
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ABP72011
UniProt:
A4WX97
LinkDB
All DBs
Position
complement(3203123..3203911)
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AA seq
262 aa
AA seq
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MTFTLATWNINSVRLREALVSRLLTEEMPDILCLQECKSPVEKMPLEAFRALGYNWCVAR
GQKSYNGVAILSKLPLVDAGDHDFADLGHARHVSATLGNGVTIHNCYVPAGGDIPDREQN
VKFGQKLDYLTRMRDWCRSDTPRKAILVGDLNIAPREDDVWNHKALLKIVSHTPIEVDHL
NALMEAGAWIDVTRKDLPEGRLYSWWSYRSPDWEAADKGRRLDHIWATPDIANAAHGSRI
LRAARGWLQPSDHAPVFATFDL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcaccctcgccacctggaacatcaactcggtccgcctgcgcgaggcgctggtc
tcgcggctgctgaccgaggagatgcccgacatcctctgcctgcaggaatgcaagagcccg
gtcgagaagatgccgctcgaggcgttccgggcgctcggctacaactggtgcgtggcgcgc
gggcagaagagctacaacggcgtggcgatcctgtcgaagctgccgctggtcgatgcgggc
gatcacgactttgccgatctgggccatgcgcgccatgtctcggcgacgctcgggaacggg
gtcacgatccacaactgctatgtgcccgccggcggcgacatccccgaccgcgagcagaac
gtgaagttcgggcagaagctcgactacctcacccggatgcgcgactggtgccggtccgac
acgccgcgcaaggccatcctcgtgggcgacctcaacatcgccccgcgcgaggatgatgtc
tggaaccacaaggcgctcctgaagatcgtgagccacacgccgatcgaggtggaccatctg
aacgctctgatggaggccggcgcctggatcgacgtgacccgcaaggacctgcctgaaggg
cggctctattcctggtggtcctaccgttcgccggattgggaggcggccgacaagggccgg
cggctcgaccacatctgggccacacccgacattgcgaacgcagcccacggcagccgcatt
ctccgcgcggcccgaggctggctgcaaccctccgaccatgcgccggtgttcgcgaccttc
gatctctga
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