Cereibacter sphaeroides ATCC 17025: Rsph17025_3538
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Entry
Rsph17025_3538 CDS
T00512
Name
(GenBank) Transposase and inactivated derivatives-like protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rsq
Cereibacter sphaeroides ATCC 17025
Pathway
rsq03030
DNA replication
rsq03430
Mismatch repair
rsq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rsph17025_3538
03430 Mismatch repair
Rsph17025_3538
03440 Homologous recombination
Rsph17025_3538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsq03032
]
Rsph17025_3538
03400 DNA repair and recombination proteins [BR:
rsq03400
]
Rsph17025_3538
Enzymes [BR:
rsq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rsph17025_3538
DNA replication proteins [BR:
rsq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rsph17025_3538
DNA repair and recombination proteins [BR:
rsq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rsph17025_3538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
ABP72408
UniProt:
A4WYE4
LinkDB
All DBs
Position
pRSPA01:429641..430489
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AA seq
282 aa
AA seq
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MKFVVLDVETANPRMSSICQIGLVTFEGGVEVAAESHLIDPEDHFDPVNVAIHGITAAAV
VGEPTFREVYGRVCDLTAGTVVACHTHFDRVALSRVCELHALPTLSCSWLDTARVARRAW
VEFSKSGYGLSNLARHFGITFQHHDALHDARAAGLILARAIEETGHDPSEWIRLCNQATR
QDRQTLRRDGDGDGPLVGESIVFTGALQVPRREAADLAHQAGAAVEPNVTKGTTILVVGD
QDIDKLAGHDKSSKHRKAEALIEAGQSLRILGEADFMRVCAS
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcgttgtgctcgatgtcgagacggctaacccgaggatgagcagcatctgccag
attgggctagtgacgttcgagggaggcgttgaggttgccgcagagagtcacctcatcgat
cccgaagaccactttgaccctgtcaacgttgccatccacgggatcaccgcggcggcggtc
gtgggcgaaccaacattccgggaggtctatggacgggtctgcgatttgacggccggaact
gtagtcgcctgtcacacccatttcgatcgcgttgcgctgtcccgcgtctgcgagctccac
gccctgccgacgctgtcctgtagctggcttgataccgcgcgtgtcgcccggcgagcttgg
gtggagttctctaaatctggatacggcctgtccaacctagcgcgtcacttcggcatcacg
tttcagcaccatgatgctcttcacgacgcacgtgcggctggtctcatcttggcacgggcg
atcgaggagaccgggcatgatccgtccgaatggatacgtctttgcaaccaagccaccagg
caagaccgtcaaaccctccgacgcgacggtgatggggacggcccgcttgttggggaaagc
atagtcttcacgggtgcgctgcaggttccccgacgcgaagcggcggacttggctcatcag
gccggggctgcggtcgagccgaacgttaccaaaggtacgaccattctcgtggtcggggat
caggacatcgacaagcttgcaggccacgacaagagcagcaagcatcgtaaggctgaggcg
ttgatcgaggcgggtcagtctctgaggatcctcggcgaagctgacttcatgagggtatgt
gcctcctag
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