Roseivirga spongicola: T7867_01400
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Entry
T7867_01400 CDS
T09626
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
Organism
rsr
Roseivirga spongicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
LysM3_LYK4_5
PXB
Motif
Other DBs
NCBI-ProteinID:
WPZ10752
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All DBs
Position
complement(303837..304757)
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AA seq
306 aa
AA seq
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MRRINYIIVCLVGFVSLSFAQSDSLGIERQGDKVFVIHKVKPQQTLYSLSRRYKTTVSEI
NSANPVLANGLQIGQTLKIPYGGVLISPDAQVTSQTQEITHRVKAGETLFAIARKYDVQV
SDIKAWNGLSSNAINLGQGLVIRRQVLTAVEQPKEEMVEQESVEESTTVAPKGINVPDSV
KVADKPFQSSPEVNTQSNTEIESVEVPEDVNYPGTPFEPKETEGIAEVIQESEPSSKFFA
LHRTAKVGTVIKVKNLMNDLTVYVRVIGTIPETSENENVIIKLNQRAYDHLKAVDKRFRV
KLNYFK
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaattaactacataattgtatgcttggtggggtttgtgagcctaagttttgcg
caatctgactcgcttggcattgaaaggcagggagataaggtttttgtgattcataaagtg
aaacctcagcaaacgctttattctctttctagaagatataagacaaccgtttctgaaata
aattcagctaaccctgttttggccaatggcttgcagataggccaaactttgaaaatacct
tacggtggagtgctgatttcgccagacgcccaggttacttcgcaaactcaggaaattact
catagagtaaaggcgggggaaacactttttgctatcgctagaaaatacgatgtgcaagtt
tctgacattaaagcttggaatggactgagttctaacgccatcaatctcggtcaaggtctt
gttatcaggagacaggtgcttacggccgttgagcagcctaaagaagaaatggttgagcaa
gagtcggtagaagaaagtacaaccgttgctcctaaaggaattaatgtaccagactctgtt
aaggtggcagataagccttttcaatcgagccctgaggtaaacacgcagtctaatactgaa
atagaatctgtagaagtgccagaagatgtaaactatcctggtactccttttgagcccaaa
gaaaccgaaggaattgctgaggttattcaagagtcagagccatcgagtaagtttttcgca
cttcatagaactgccaaggtaggaaccgtgattaaggtgaagaatctgatgaatgatttg
acggtgtatgttcgagttatcggtacaattcctgaaacctcggaaaacgaaaacgtgatt
attaagttgaaccaaagggcttatgatcatctaaaagcagtagataaaagattcagagtt
aagctgaattacttcaagtaa
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