Roseivirga spongicola: T7867_01750
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Entry
T7867_01750 CDS
T09626
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rsr
Roseivirga spongicola
Brite
KEGG Orthology (KO) [BR:
rsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsr03400
]
T7867_01750
Enzymes [BR:
rsr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
T7867_01750
DNA repair and recombination proteins [BR:
rsr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
T7867_01750
Prokaryotic type
T7867_01750
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Fin
Motif
Other DBs
NCBI-ProteinID:
WPZ10820
LinkDB
All DBs
Position
complement(374008..375477)
Genome browser
AA seq
489 aa
AA seq
DB search
MPKQEVSIVWFKRDLRLTDHLPLRRAIESGDKLLLLYCFDPELIADPHYDVRHWRFIWES
IEDMNEILKPLGHQVEVFYTGFRKSLTYFSDIYHLKSIYSHQESGLKVTYDLDKWVKKFC
GQNGVQWNEYLHNGVLRGAKNRKDWLKEFHGYMKSALDRPDLEKLQTIELAESVRQKFGK
PVPKEFQSYNPNFQKGGASIGKKYMKSFLTDRVQHYSKSISKPEESRKGCSRLSPYIAWG
NLSLREVYQARLTAKDQFGFKRQLANFGSRLQWHAHFVQKFEMEDRYEFENINRGYDFLE
KEEKPELIQAWKDGKTGVPLVDACMRCLKETGYINFRMRAMLVSFLTHHLWQHWKEGAQY
LASQFLDFVPGIHYPQFQMQAGMTGINTIRIYNPIKQSQDHDPEGKFIKKWVPELSDVPS
EYIHVPWLMPPLEARMLNINPEDLKPVVDVKAAAERARKALWSHRNHTEVRKENYRILKK
HTIPGRRMQ
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagcaggaagtttccattgtctggtttaagcgagatcttcgactcacagatcac
ttgcctctgagaagagcgattgagtctggagataagttgcttctgctttactgtttcgac
ccagaactgattgcagacccacattatgatgtgcgacattggcgatttatttgggaatct
attgaggatatgaatgaaattctcaagcctttaggtcatcaggttgaggtgttttacact
ggttttcgaaaatcgttaacctacttctctgatatctatcatctaaagtctatatactct
caccaagaaagcggacttaaggttacttatgatctagataaatgggtgaagaaattctgc
ggtcagaatggagtgcaatggaatgagtatttgcataatggtgtgttacgcggggctaaa
aaccggaaagattggctgaaggagtttcatggttacatgaagtctgctttggatcgacca
gatttagaaaaactccaaacaattgaactcgctgagtctgtaaggcagaagttcggcaag
ccggttcctaaagagtttcaatcgtacaatcccaacttccaaaaagggggagcttcaatt
ggtaagaagtatatgaaaagcttcttgaccgatagagtgcagcattattctaagtcaatc
tcaaaacccgaagaaagcagaaaaggctgcagccgcttatctccttatatagcttggggg
aatttgagtctcagagaagtctatcaggccagattaactgctaaagatcaatttggcttc
aaaaggcagttggccaactttggttctagacttcagtggcatgcgcactttgtgcaaaag
ttcgaaatggaagaccgttacgagtttgagaacatcaaccggggatatgatttcttagag
aaggaagaaaaaccagaactgattcaagcttggaaagatggtaaaactggagtgccattg
gtagatgcttgtatgaggtgtttgaaggaaacgggctatattaatttcagaatgagagcc
atgcttgtaagttttctaacgcaccatttatggcaacactggaaagaaggagcccagtac
ttggcttcacagtttttagattttgtgccgggtattcactatccacagtttcagatgcaa
gctgggatgaccggcataaataccatcagaatctacaatcccatcaagcaaagccaagat
catgatcctgaaggaaagtttatcaagaaatgggtgccagagctatcagatgtgccttct
gagtacattcatgtgccttggctgatgcctcccttggaggctcgtatgctgaacataaac
cccgaagatcttaagccagtggtagatgttaaagccgcggctgaaagagctagaaaagca
ctgtggtcacatcgcaatcacactgaagtgagaaaagaaaactaccgcatcctgaaaaag
cataccattccggggaggcgaatgcagtag
DBGET
integrated database retrieval system
