Roseivirga spongicola: T7867_02820
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Entry
T7867_02820 CDS
T09626
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rsr
Roseivirga spongicola
Pathway
rsr03030
DNA replication
rsr03430
Mismatch repair
rsr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
T7867_02820 (dnaE)
03430 Mismatch repair
T7867_02820 (dnaE)
03440 Homologous recombination
T7867_02820 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsr03032
]
T7867_02820 (dnaE)
03400 DNA repair and recombination proteins [BR:
rsr03400
]
T7867_02820 (dnaE)
Enzymes [BR:
rsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
T7867_02820 (dnaE)
DNA replication proteins [BR:
rsr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
T7867_02820 (dnaE)
DNA repair and recombination proteins [BR:
rsr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
T7867_02820 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
Motif
Other DBs
NCBI-ProteinID:
WPZ11029
LinkDB
All DBs
Position
625204..628233
Genome browser
AA seq
1009 aa
AA seq
DB search
MYLNTHSYYSFKYGTINTKSLLEIMQQAEVNTFALTDINSTAASINFVRLAPRFGIKPVL
GIDFRNGADQLFVAIAQNNEGFKELNDYLSKYLHSKEEIPPRAPAFQHAFVVYPFSKYTG
FELKKLEFIGVKPKDLPKLVYPPHQMDKQKLVAMPTATFRSKIDKETGERVVMKRDFNAH
RLLRAIDKNTLLSKLPKTEEADPGDFIYPTEELKEVYSAHLYMLENTEELLSQCHIHFDF
EGENLNKNLKSFTESPEKDYQELEKLCEEGLPYRYPNPSEKIRTRIKTELDVIRRQGFMS
YFLINWKLCKYAREKGYFYVGRGSGANSIVAYLLRITDVDPIELDLYFERFINLYRQNPP
DFDIDFSWKDREDITQFIFKEFQHGEGGNVSLLATYSTFQFRAVIRELGKVLGLPAHEIE
HIQATSYNQLDETQKLVLRYGKYIEGFPSHLSIHAGGILISEKPIHYYTATDLPPKGFPT
THFDMIIAEDIGLYKFDILSQRGLGKIKDSLDIIARNHPEDEAIDIHNIAKFKKDERVKT
MLKEGKAIGCFYVESPAMRMLLKKLRVDEYLGLVAASSVIRPGVAKSGMMRQYILRFREP
ERRNEAHPKLREIMPETYGVMVYQEDVIKVAHMFADLTLAEADVLRRGMSGKYRSRAEFQ
KVQEKYFVNCQKKGYSLELAKDIWRQIESFAGYAFAKGHSASYAVESYQSLYLKAYYPLE
YMVATINNGGGFYRVELYAHEAFMHGADIQAPCVNQSEQLCTIYGKSIFMGFAFISELEH
STMEAILEERSENGVFMSFDNFMKRVPISLDQLSLLIRINAFRFTGIGKKELLWDAHFRL
GNGKKSRPEKMLFDFGVKRFQIPELSYDHLEDAFDQIELLGFPLGNPFDMLKDRPEEEVM
VREMGLHKNKEVTMVGYLIHIKNTNTSGGKRMQFGTWLDREGHFIDTTHFPPIAAKYPFR
GKGIYELKGKIVEEFDFLSMEITAMRKLQYIHDPRLATEARHATMGVSS
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgtacctcaacacccactcatattacagctttaaatacggcactataaataccaaatca
ctgcttgaaattatgcagcaagcagaggtaaatacttttgcccttaccgatattaacagc
actgccgctagcatcaactttgtccgactagctcctaggtttgggattaagccggtttta
ggaatagactttagaaatggggcagatcagctttttgtagctattgcgcagaacaatgaa
ggcttcaaagaactgaatgattacttgtcgaaatatctgcacagcaaggaagaaattcct
ccgagagctccagcatttcagcatgcttttgtggtttatccttttagcaagtacacaggc
tttgagctaaaaaaattagagttcattggagtaaaacccaaagacctacccaagttggtt
tacccgcctcaccaaatggataaacagaaattggtagccatgcccactgctacttttcgc
agtaaaatagataaggagacaggagaacgtgtagttatgaaacgcgacttcaatgcccat
cgtctgctaagggccatcgacaagaacaccttgttgagtaaactacccaaaaccgaagag
gccgacccgggagatttcatctacccgactgaggagttgaaggaggtttattccgcccac
ctctatatgcttgagaatacggaagagctacttagtcaatgccacattcacttcgacttt
gaaggagagaacctaaataagaacctcaagtcttttaccgaatcgccagagaaagactac
caagaactggagaagctctgtgaagaagggcttccctaccgataccctaatccatctgaa
aaaattagaacccgaattaaaacggagttggatgtaatcaggcggcagggctttatgtct
tactttctcattaactggaaactctgcaaatatgctcgagagaaaggctatttctacgtt
ggccgaggcagtggcgctaatagcattgtcgcctacctattacgcattaccgatgtagac
ccaattgagctcgatttgtatttcgagcgattcatcaacctctatcgccaaaacccaccc
gatttcgacatagatttctcatggaaagaccgagaagatattacgcagttcatctttaaa
gaatttcagcatggagaaggcggaaatgtatcgctccttgctacctatagtacttttcag
tttagggcagttatccgcgaactaggaaaagtacttggcctacccgcccatgaaattgaa
catattcaggccaccagctacaatcagctagacgaaacccaaaagctggtgcttcgctac
ggaaagtacatcgagggcttccctagccacctcagcattcatgccggaggcattctcatt
tccgagaaacccattcattattacaccgccacagatcttcccccgaagggtttccctacc
acccatttcgatatgattattgctgaagatattggcctttataagttcgatattctgagt
caacgaggcttgggcaaaatcaaagacagtctagacattatcgctagaaaccaccctgaa
gatgaagcgatagatatacataacatcgccaaattcaagaaagacgaacgcgtaaaaacc
atgcttaaagaagggaaagccattggttgtttttatgtggagtcgcccgccatgcggatg
ttgctgaaaaaactccgagtagatgagtatttgggcttagtggcagccagttcggtgatt
aggcccggagtagcaaaatcgggcatgatgcgccaatatattctccgctttcgcgaacct
gaaagaagaaacgaagctcaccctaagctgcgcgaaattatgccagaaacttatggcgta
atggtttatcaggaagatgtaataaaagttgcccacatgtttgccgacctcactctagcc
gaagccgatgtattgagaagaggcatgtctggcaaatacaggtcgcgcgcagagtttcaa
aaggttcaggaaaagtactttgtcaactgccagaaaaaaggctactcacttgagctagca
aaagacatttggcgacaaattgaaagctttgctggctatgcttttgccaaggggcactca
gccagctatgccgtagaaagctaccaaagcctctacctcaaagcctattatccgctagaa
tatatggtagccactattaataatggcggtggattttatagggtagaactctatgctcac
gaagcttttatgcatggagccgacatacaggcaccttgcgtaaaccaaagcgaacagctt
tgcactatttatggcaaaagcatatttatgggctttgcctttattagcgaattagagcac
agcaccatggaggctatacttgaagagcgttctgaaaatggtgtattcatgagcttcgat
aactttatgaaacgagtacccatttctctagatcagctcagcctactaatacgcatcaat
gcctttcgctttacgggcattggcaaaaaagagctgctttgggacgctcactttaggttg
gggaatggcaaaaaatcacgccctgagaaaatgcttttcgactttggggtgaagcgcttc
caaattcccgaactcagctatgaccacctagaagacgctttcgatcagattgaactcctt
ggttttccgcttggtaaccctttcgatatgcttaaagatcggcctgaagaagaagtaatg
gttcgagaaatggggctacataaaaacaaggaagtaacaatggttggttacctcatccac
attaaaaacaccaacacttctggcggcaagcgtatgcagtttggtacttggctagaccga
gaagggcattttatagacaccactcatttccccccaatagctgctaagtatccttttaga
ggaaagggtatttatgagctcaaaggaaaaattgtggaagaattcgacttcctcagcatg
gaaattacagccatgcgaaagctgcagtacattcacgacccaaggcttgccaccgaagcc
aggcatgcaactatgggcgtttcgagctag
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