Roseivirga spongicola: T7867_03055
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Entry
T7867_03055 CDS
T09626
Symbol
secDF
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
rsr
Roseivirga spongicola
Pathway
rsr02024
Quorum sensing
rsr03060
Protein export
rsr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
T7867_03055 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
T7867_03055 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
T7867_03055 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rsr02044
]
T7867_03055 (secDF)
Secretion system [BR:
rsr02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
T7867_03055 (secDF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
Big_5
Motif
Other DBs
NCBI-ProteinID:
WPZ11076
LinkDB
All DBs
Position
complement(678893..681916)
Genome browser
AA seq
1007 aa
AA seq
DB search
MKNKNTIVFLTVIITVLCVYYLSITFFSRGIQADAIEYAKDEAGIIDQQKKQAYLDSIWM
EPVLNLLGAEFTYKDIKEQELNLGLDLQGGMHVTLEVSPVEIIKGLSGNSQNADFQRALE
LASERQRNSQASYTQLFEEAWNEVAPEGRLSRVFANAANRGRISFESSNSDVMELINEEV
DQAIDRAFQILRTRVDRFGTSQPNIQRIQGTGRIQIELPGVDNPARVRKLLQGVAKLEFW
EVYSPSEVNPTLSAINDELLRIEREQKGTSLNTEATANPSNDESSNSLEAQMSQNDSTAS
DTNSLDSDSGVSSFFSLMRSGPYEGFYYNLADTGTINRALKHERIKRLIPANVSFKWSVK
PVKDTELLQMYAIKATRGEAPLTGEVVTDARVSLDDRAQPAVSMNMNTVGAKKWKNLTAQ
NIGRSVAVVLDNYVYTAPTVQVEIANGSSQISGNFTQEEADDLANILKAGSLPAPTRIVE
EAVVGPTLGKEAQAQGVTSIVAGLLIVVVFMIFYYSKGGLVANVALLFNIFFILGILANI
GSALTLPGIAGIVLTIGMSIDANVLIFERIREELRNGVPLLQAINSGYQKAYSSIIDANV
TTLLTGIILFWLGQGPIKGFAITLIIGIICSFFSAVFITRVIVTWMTRKGNESNISFETP
LSKGMLSNINLDFLGKRRMAYMISSVIIVVGIAALLTSGLRLGVDFKGGRSYVVQFDEPM
TASDVKTSLSSGVFTDDGVEVKTYDASNILKITTSYRVDEESTEADQDVKDALTTGLADA
TGKQFIDGTVDLQDGQFTIIASSKVGATIADDIKKSSFEAFGLSILAIFVYILIRFRRWQ
FSLGAIVALIHDAIIVMSAFAIAGWFGISFEIDQVFIAALLTIIGYSINDTVVVFDRIRE
TLQLKGSKDLINTFNISINSTISRTLITSATTMIVVLILLIFGGEVLRGFSFALLIGILV
GTYSSVFIATPTVVDLTKKSLGAAADKEQASARAKAAAKAEATAQQG
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataagaataccattgtctttttgacagtcataatcacggttttgtgcgtgtat
tatttgtcaattaccttcttctctagaggtattcaggccgatgccattgaatacgctaaa
gacgaagctggaattattgaccaacaaaagaaacaagcttatctagattctatctggatg
gagccagtacttaaccttttaggtgctgaatttacttacaaagacatcaaagagcaggag
ttaaaccttgggcttgaccttcaaggtggaatgcatgttactttggaagtttctccagtt
gagatcatcaaaggtctttctggcaacagccaaaatgccgatttccaaagggctttagaa
cttgcatctgagcgtcagagaaatagccaagcttcatacactcaattgtttgaagaggca
tggaacgaagtggctccagagggcaggttgagcagagtgtttgctaatgctgccaacaga
ggtagaatcagcttcgagtcttctaactcagatgtaatggagcttatcaacgaagaagtt
gatcaagctattgacagagcatttcaaatcttgagaactagggtagaccgtttcggtact
tctcaacctaacattcagagaattcagggaactggtagaattcaaattgagcttccaggg
gtagataaccctgcaagggtaagaaagcttttacaaggagttgcaaagctcgagttttgg
gaggtttattctccatctgaagttaacccaacgttatctgcaatcaatgatgagctatta
agaattgaaagagagcaaaaaggtactagccttaatactgaggccacagctaacccaagc
aatgatgagtcttctaactcattggaggctcagatgtctcaaaatgacagtacggcttca
gatactaatagcttagattcagactcaggagtttcaagcttcttcagcctaatgagatca
gggccatacgagggtttttactataatttagctgatacaggtactatcaaccgcgcgtta
aagcatgagagaattaaaaggttgatacctgcgaatgtgtcttttaagtggtctgttaag
ccagttaaagacactgagttacttcagatgtatgcaattaaggctactagaggagaggct
cctttaactggtgaggttgttacagatgctagagtgtctttagatgacagagcacaacct
gcagtaagcatgaacatgaatacagtaggtgcaaaaaaatggaaaaaccttactgctcag
aatattggtagaagtgtggcagttgttttggataactacgtttacactgctccaaccgta
caggtagaaattgcgaatggtagctctcaaatttcaggtaattttactcaagaagaggct
gacgatttagcgaatatcttgaaggcaggttcacttcctgctccaaccagaattgtagaa
gaagctgttgtaggtccaactctaggtaaagaggcacaagcgcagggtgttacttcaatt
gtagcaggtctattgattgtagtagtgtttatgattttctactactctaaaggtggttta
gtagctaacgttgcactattgttcaacatcttcttcattcttggaattttggctaacatt
ggttcagcacttacacttcctggtattgctggtattgtattgaccattggtatgtcgatt
gatgctaacgtactaatcttcgaaagaattagagaagagttaagaaacggtgttccattg
cttcaggctattaattctggttatcagaaagcttacagctcaatcattgatgctaacgtt
actactttattaacaggtattatcttgttctggttaggtcaaggcccaatcaaaggtttc
gctattaccctaatcatcggtattatctgttcattcttctctgcagtattcattaccaga
gtaattgttacttggatgactagaaagggtaacgagagcaatatttcgttcgagacgcct
ctttctaaaggaatgttgagcaatattaacctagatttcttgggtaagagaagaatggct
tacatgatctcttctgtgattattgtagtaggtattgctgcacttctaacaagcggattg
aggcttggtgtagacttcaaaggaggtcgttcttatgttgttcagttcgatgagccaatg
actgcttctgatgttaaaacttctctttctagtggagtatttactgatgatggtgttgag
gtgaaaacttacgatgcaagtaacattttgaagattactacttcatacagagtagatgaa
gagtctaccgaggcagatcaggatgttaaagacgcattaacaactggtttggctgatgct
acaggtaagcagtttatcgatggaacggtagacttacaagatggtcagtttaccattata
gcatcttctaaagtaggagctactattgccgatgatattaagaaatcttctttcgaagcc
ttcggtttatctattcttgcaatcttcgtttacatcctcatcagatttaggagatggcag
ttctcactgggtgccattgttgccctaattcacgatgcaatcatcgtaatgtcagcattt
gccattgcaggttggttcggaatttcatttgagatagatcaggtatttatagcagcattg
ttaactattattggttactcgataaacgataccgtggttgtgtttgaccgtattcgtgaa
acactacagttgaagggttcgaaagacttgatcaatacgttcaatatctctatcaactct
actattagccgtacattaattacttcagctactacaatgattgtggtattgattctattg
atcttcggtggcgaagtattgagaggattctcattcgctttattgataggtattttggtg
ggtacttactcatctgtatttattgcaactcctacagtagtagacttaactaagaagtca
cttggagctgctgctgacaaagagcaagcttctgcaagagcaaaagctgccgctaaggca
gaggctactgctcagcagggataa
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