Roseivirga spongicola: T7867_03410
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Entry
T7867_03410 CDS
T09626
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rsr
Roseivirga spongicola
Pathway
rsr00300
Lysine biosynthesis
rsr00470
D-Amino acid metabolism
rsr01100
Metabolic pathways
rsr01110
Biosynthesis of secondary metabolites
rsr01120
Microbial metabolism in diverse environments
rsr01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rsr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
T7867_03410 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
T7867_03410 (dapF)
Enzymes [BR:
rsr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
T7867_03410 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
DUF5749
CntK_N
Motif
Other DBs
NCBI-ProteinID:
WPZ11146
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All DBs
Position
complement(758899..759672)
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AA seq
257 aa
AA seq
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MATISFYKYQGTGNDFVMIDNRDQRFDKSNLSLISHLCDRRFGIGADGVILIEESASSDF
EMIYFNPDGSQSLCGNGSRCAVMFACFLQIIEDETAFMAIDGEHTARIDGDLVHLKMHDV
ESYEEIGEDYLIDTGSPHYIKYVESIDTIDPIAEGRSIRYSERFSEKGVNVNFLEKVNTN
TLNIRTYERGVEGETLSCGTGCTAAALSLGLQQELASVNLQAQGGLLRVDFKKENGRFSN
IYLIGPAKAVFQGQIEV
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggccactatttcattctataaatatcaaggtactggtaacgattttgtcatgatagat
aatcgtgaccagcgcttcgataagtctaacctttcattaatctcccatctttgtgacaga
cgttttggtattggagccgatggcgtaatcctcatcgaagagtccgcttcctcagacttc
gagatgatttattttaatccagatggttctcaatctctctgtggcaatggtagtcgttgt
gcggtaatgttcgcgtgcttccttcagattatcgaagatgaaactgccttcatggcaata
gatggcgagcatactgcccgcatagatggtgatttagtccatctcaaaatgcacgatgtg
gagagttatgaagagattggcgaagattacctaattgatactggttccccccattatatt
aagtatgtggaaagtatagatacaatagacccgattgctgagggtaggtcgattagatat
tctgagagattttcagagaagggtgttaatgttaatttcttagagaaagtaaacaccaat
accttgaatattagaacctatgaaagaggggtggaaggagaaaccctcagttgtggtact
ggatgtaccgctgcggcactttcattagggcttcaacaagagctggcttcagtgaattta
caggcacaaggcggtttgttaagagtagactttaaaaaggagaatggtagattttccaat
atatatttaattgggccggcaaaggcagtttttcaaggtcagatagaagtttaa
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