Roseivirga spongicola: T7867_04210
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Entry
T7867_04210 CDS
T09626
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rsr
Roseivirga spongicola
Pathway
rsr00300
Lysine biosynthesis
rsr00470
D-Amino acid metabolism
rsr01100
Metabolic pathways
rsr01110
Biosynthesis of secondary metabolites
rsr01120
Microbial metabolism in diverse environments
rsr01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rsr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
T7867_04210 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
T7867_04210 (lysA)
Enzymes [BR:
rsr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
T7867_04210 (lysA)
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Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
NOP19
Motif
Other DBs
NCBI-ProteinID:
WPZ11305
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Position
complement(930825..932057)
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AA seq
410 aa
AA seq
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MELVNDKFSIQGVVLEDLAAEYGTPLYVYDATKIKSQFDRLNSAFSTVDMKVKFACKSLT
NLSILKLLKSYGSELDCVSIQEVRMGLKAGFSPGQILYTPNCVSFAEIQEAVKIGVMINL
DNISILEQFGNEYHDSVPVCIRLNPHIMAGGNKKISTGHADSKFGISIYQMAHILKVVST
YNLNVVGLHMHTGSDILDAEVFLRAAEILFDAAKNFTNLDFIDFGSGFKVAYKEGDITTD
IEEVGQKLSAAFNEFCEAYGRKLQMWFEPGKFLVSESGVFLTKTNVVKTTPATVFAGVDS
GMNHLIRPMMYDAYHEIVNVSNTSGTKRVYTVVGYICETDTFGLDRKLSEVKEGDILAFK
NAGAYSFSMASNYNSRLRPAEVLIYEGKAHLIRKREEFEDLLKNQVELDI
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggaattggttaacgataaattcagcattcaaggagttgttttagaagatctcgctgca
gagtacggaactccactttacgtttatgacgctactaaaataaagtcacagttcgataga
ttgaattcggcatttagtaccgtagatatgaaggttaagtttgcctgtaaatctttaacc
aacctttctatccttaagctactcaaaagttatgggtctgagttagactgtgtttcaatt
caagaggtaagaatggggctcaaagcaggttttagcccagggcagattctatatactccc
aattgtgtttccttcgctgaaattcaagaagccgtgaaaatcggtgtaatgatcaactta
gataatatttccatcttggagcagtttggaaatgaataccatgactcagttccggtgtgt
attcgactgaacccgcacattatggctggaggaaataaaaagatttctacaggtcatgcc
gattcgaagtttggtatttccatatatcaaatggctcacatacttaaagtggtttcaact
tacaacttaaatgttgttgggcttcatatgcataccggatctgacatattggatgcggag
gtgtttttaagggctgcagaaatacttttcgatgctgctaagaacttcactaatctagac
tttatagattttggaagtggctttaaagtggcttataaagaaggagatattaccaccgat
attgaggaggtaggtcaaaaactctcagcagcttttaatgagttttgcgaggcttatggt
aggaaattacaaatgtggttcgagcctggaaagtttctggtaagtgagtctggtgtattt
cttactaaaactaatgtggtgaaaacaacaccggcaactgtgtttgctggagtagattca
ggaatgaatcacctaattagaccaatgatgtacgatgcctaccatgagatagtcaatgtt
tcaaatacctctggcacgaaacgtgtttatacggtggttggctatatctgtgaaaccgat
acgttcggtttagacagaaagcttagtgaagtaaaggaaggtgatattctggctttcaaa
aatgctggagcatactcttttagcatggcttctaattataactctaggctaagacctgcc
gaggtgcttatttatgaaggaaaggcacatcttataagaaagagagaggagtttgaagac
cttttgaaaaaccaggtggagctagatatttag
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