Roseivirga spongicola: T7867_04235
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Entry
T7867_04235 CDS
T09626
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
rsr
Roseivirga spongicola
Brite
KEGG Orthology (KO) [BR:
rsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsr02000
]
T7867_04235
Transporters [BR:
rsr02000
]
Other transporters
Pores ion channels [TC:
1
]
T7867_04235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
OMP_b-brl_3
PapC_C
CILP
Motif
Other DBs
NCBI-ProteinID:
WPZ11310
LinkDB
All DBs
Position
complement(936432..938813)
Genome browser
AA seq
793 aa
AA seq
DB search
MNRVWIAVIFLGCFFFQGAIAQQDCDFNLRGQVFSTEDGEPIPFATIILNNEGEKATVSD
ERGEFLFENLCDKEAIISIRFVGFITLTDTLLLEAGTNEFEFKLEVNVQDLSEVTVEEEA
VEEVATISRVEINTKALEKTAGESLGKSLSGLTGVNMLQTGPTIAKPVIHGLHSNRILIL
NNGIRQEGQQWGQEHAPEIDPFVANNLRLIKGAAAVKYGSDAIGGVILVNPAELPKTPGI
AGKASLIGAENNRMYAGSLLLEGGLKGLEGFGWRVQGTYKKAGDARASDYRLTNTGTFEN
NYSIGVGYHEDNLGAELFFSSFDAEIAILRSAHIGNLTDLERAIGSEQPLFIEDFSYDIN
NPYQAVNHKLLKANGHIEVSDLGQFSVQYGMQVNSRQEYDIRRAGRSTIPALSLDLYTHT
LDLDFDMRHRGNWKWDVGASFMYQNNENDSETGIRPLIPDFENWVAGAHLIARFIKPSYE
LEAGARYDFRHYLIKRFDRQNNLLKPEFDFNNITGSVGALFFLPNDFQLRTNIGTAWRAP
HVNELYSEGLHHGSAAIEEGNDQLKSEKSVKWITSIEKSVDRYSLTLSGYINYITDYIYL
RPEDVSLTIRGAFPVFRYRQTDALLSGLDFDLKYNLSERLESESKVSFIYAQDRVSKSPL
INIPANSISSGIEYDLKIKGLENSYFGLDASYTDRQRNDPRVVSIAEIRDSNDQGSDLFE
GDQSVFDILEVPDAYLLIDVSAGFEKQISSNTLKVNLSVNNLFNTEYRDYLNRFRYYADE
MGRNVTLRLILEF
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgggtgtggattgcggtaatatttttaggctgtttcttttttcaaggagctatt
gctcagcaagattgtgactttaacctgagaggccaggtgttttctacagaggatggggag
ccaattccttttgcaactatcatactgaataatgaaggagagaaagctactgtttccgat
gaaagaggagagtttcttttcgaaaacctttgtgataaggaggcaattatttccattcgt
tttgtaggcttcattactttgacagatacactgttattagaagcaggtacaaatgaattc
gagtttaagttagaggtgaatgtccaagatttatcagaagttactgtagaggaagaggcc
gtagaagaagttgccacaattagcagggtcgaaatcaacacgaaggccttagaaaaaaca
gcgggggagtccttaggtaaaagtctgtcagggcttacaggggtaaatatgcttcagacg
ggtccaaccattgctaaaccagtaattcatgggctgcacagcaatcgtattcttattctt
aataacggcattagacaagaaggtcagcaatgggggcaagagcatgcaccagaaatagac
ccctttgtcgctaataacctaaggcttattaaaggagcggcagcggttaaatatggctcc
gatgcaattggtggggttatacttgttaatccagcagaattgccaaaaacccctggtata
gctggtaaggcgagtttgattggagcggagaataatagaatgtatgctggttcattattg
ttagaaggtggtctcaaaggcttagaaggttttgggtggagagttcaaggtacttataaa
aaggctggagatgctagagcatcagattataggcttaccaatactggaacattcgagaac
aactattctataggcgttggttatcatgaagataatttaggtgctgagttgttcttcagt
agtttcgatgccgaaatagccatattaagaagtgcgcacattggcaacctaacagattta
gaaagagcaattggcagtgagcagcctctgttcatagaagattttagctacgatattaat
aacccttatcaggcagttaatcacaaactcctaaaagcaaatggccatatagaggtttct
gacttgggtcagttttcagttcaatatggaatgcaagtgaactctaggcaggagtatgac
attagaagagcgggcagatcgactataccagcactttcgttggatctttacactcatacc
ttggacctagattttgatatgaggcacagaggtaactggaagtgggatgttggagctagc
ttcatgtatcagaataatgagaacgactccgaaactggtattcggccgttaattcctgat
tttgaaaactgggtggctggagctcatttaattgccagattcattaagcccagttatgaa
ttggaggctggagcgcgttatgattttaggcattacttaataaagagatttgatcggcag
aataacttactcaaaccggagttcgatttcaataatattactggttctgttggtgctctt
ttctttttaccaaatgactttcagttaagaactaatattggaactgcttggagagcacct
cacgtaaatgagctgtatagcgaggggctacatcatggctctgcggctattgaagaagga
aacgaccagttaaagagtgaaaagtctgtaaagtggattacaagcatagaaaagtccgta
gacaggtatagtttgactttgtctggctatatcaattacataacagactacatttatttg
aggccagaagatgtgagcttgacaattagaggggcgtttcctgtatttagataccgacag
actgatgctcttctttcaggtttagatttcgacttaaagtataatttgtccgagaggtta
gaaagtgagagcaaagtgtcgtttatctatgcccaagacagggtttctaaaagtccttta
attaatattcctgctaattcaatatcaagtggaattgaatacgatttaaagattaaagga
cttgagaattcatactttggtttagatgcaagttatactgataggcaaaggaatgatcct
agagtagtttctatagctgaaattcgtgattcgaatgatcagggctcagatttgtttgaa
ggggaccagtcagtttttgacatactggaggtgccagatgcttacttgctgatagatgtt
tctgctggttttgaaaagcagatatcgtccaatacacttaaggttaacctttcagtcaat
aacctattcaacacagaatacagagattatctgaataggttcagatactacgctgatgaa
atgggtagaaatgtaaccctgaggctaattttagaattctaa
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