Roseivirga spongicola: T7867_04750
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Entry
T7867_04750 CDS
T09626
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
rsr
Roseivirga spongicola
Brite
KEGG Orthology (KO) [BR:
rsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsr03032
]
T7867_04750
03036 Chromosome and associated proteins [BR:
rsr03036
]
T7867_04750
03400 DNA repair and recombination proteins [BR:
rsr03400
]
T7867_04750
DNA replication proteins [BR:
rsr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
T7867_04750
Chromosome and associated proteins [BR:
rsr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
T7867_04750
DNA repair and recombination proteins [BR:
rsr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
T7867_04750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
ParD_antitoxin
RecA-like_ORC2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
WPZ11412
LinkDB
All DBs
Position
1043231..1043533
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AA seq
100 aa
AA seq
DB search
MTKADVINQIADKTGIDRSDVTTTVETLFAVVKDSMAEGENIYVRGFGSFVNKKRAKKIA
RNISKNTAIVIDEHFVPSFKPSKVFVEQVKTSSKVKAANS
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
gtgactaaagcagatgttatcaatcagatcgcggacaaaacaggtatcgatagatctgat
gttactacaactgttgagactctttttgctgtggttaaggattcgatggctgagggtgag
aacatttatgtaagagggtttggaagctttgtgaataagaagagggcaaaaaagattgct
cgtaatatttctaaaaacacggctattgttatcgatgagcactttgtgccaagttttaaa
ccgtcaaaggtttttgttgagcaggtgaaaaccagctctaaagttaaagctgcaaatagt
taa
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