Roseivirga spongicola: T7867_07255
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Entry
T7867_07255 CDS
T09626
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
rsr
Roseivirga spongicola
Pathway
rsr00550
Peptidoglycan biosynthesis
rsr01100
Metabolic pathways
rsr01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rsr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
T7867_07255 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
T7867_07255 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rsr01011
]
T7867_07255 (mrdA)
Enzymes [BR:
rsr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
T7867_07255 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
rsr01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
T7867_07255 (mrdA)
BRITE hierarchy
Motif
Pfam:
Transpeptidase
PBP_dimer
DUF2155
Motif
Other DBs
NCBI-ProteinID:
WPZ11903
LinkDB
All DBs
Position
complement(1652750..1654582)
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AA seq
610 aa
AA seq
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MLENRRYIIQGLFILIGVVFLVKLFALQVVDKTYQMKAERNIVHTIVEYPFRGLMYDRNE
KLIVYNEPIYDIMVVPRDVHVADTAEFCRLFDITKEDFLANMKKARAYSPVKPSAFLKKL
SHQKYAEIQDNLYQFNGFYANPRTVRRYTKPILANEVGYIGEVSPRDLELDTTNYYKSGD
YKGLTGLEQYYEKELRGERGVSRKVVNVNGIEKGNFKNGELDTASTPGKNLITTIDLELQ
AYAEKLMAGSRGSVVAIDPKTGEILVMVSAPSYDPNLLSGKNFGKYFQQIKNDTTAPLFN
RAIQAKYPPGSIFKTVQALIALDEGVIDAYEPIKVTLGRLGDHAPAGMYDVARGIEHSSN
NYFWEVMRRTVNQGVGNSIFTDTPIGLEKWTAAVKRFGFGSPLGIDIKGEVGGTVPDVNM
YNRMHGERRWAYPTIYSLSIGQGELEVTPLQVANLAAIIANKGYYITPHLVKAIEENGVQ
KPLQFEKHYTGKGDEYYPAIIDGMVRAVKRTAGRALIPDIPIAGKTGTAENGKKDETLDH
SVFMAFAPADDPKIAIAVYTENAGWGGGASGVTASLIIEKYLRGYIKETWAKREDYILNK
KYLIGLQQEN
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaaatagaagatacataattcagggtctttttattctgattggagtagtattc
ttggttaaactgttcgctcttcaagtggtagataaaacctatcagatgaaagctgaacgc
aatattgtacacacaattgttgagtacccttttcgtgggttaatgtacgatagaaatgaa
aagctgatagtctataacgagcctatttatgatataatggtagtgcccagagatgtgcat
gttgctgacactgccgagttttgcaggcttttcgatattaccaaagaagattttctagcc
aacatgaagaaggcgagagcctactctcctgttaaaccttcggcttttctcaaaaaactc
tctcatcagaagtatgctgaaattcaggataatctttatcaattcaacggcttttatgcc
aacccaagaaccgtaagaagatatactaagccaatattggctaatgaggtaggttatata
ggcgaagtaagcccgcgcgatttggaattagacactaccaattactacaaatctggagac
tataaaggacttactggtttagaacagtactatgaaaaagaactacgtggagagcgtggt
gtaagccgaaaggttgttaatgtaaatggcatagaaaaaggcaacttcaaaaacggtgaa
ctcgatacggcttcaaccccaggcaagaaccttataactaccattgacttagagcttcaa
gcctatgctgaaaaactaatggctggtagccgaggcagtgtagtagctatagatccaaaa
acaggcgagattttggtaatggtctcggcaccttcatacgatccaaacttgctttctggt
aagaactttggaaagtactttcagcagataaagaacgatactaccgcccctctatttaac
agagcaattcaggccaaatatcctccagggtcaatattcaagactgttcaagcccttatt
gctttagatgagggtgttatagatgcttatgagcctataaaggttacattaggcaggtta
ggagaccatgcccctgctggtatgtatgatgttgctagaggtatagaacactcctctaac
aactacttctgggaagtaatgcgcagaacagttaatcagggagttggcaacagcatattc
actgacactccaattggtctagaaaaatggacagctgctgttaaacgatttggttttggt
tctccattagggatagacatcaaaggagaggttggaggaactgtacccgatgtaaacatg
tataatcggatgcatggcgaaagaaggtgggcttacccaactatctactccctttcaatt
ggccaaggagaactggaagttacaccacttcaagtggctaacctagccgccataattgct
aataaaggctattatattaccccacacctagttaaggctattgaagagaatggcgtacag
aagcctcttcaatttgaaaaacattatactggcaaaggagatgaatactatcccgctata
attgacggtatggtgcgcgcggttaaaagaactgcaggcagagctctgataccagatatc
ccaatagcgggtaaaactggaacagcagaaaacggcaaaaaagatgaaacattagatcac
tctgtatttatggcatttgcacctgcagatgatcctaaaattgccatagcggtatatact
gaaaatgcaggctggggcggaggagcttcgggcgttaccgctagtttaattattgagaaa
tacttgagaggctacatcaaagaaacctgggccaaaagagaagattacatcctgaataaa
aagtacctaatagggttacagcaagagaattga
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