Roseivirga spongicola: T7867_07790
Help
Entry
T7867_07790 CDS
T09626
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rsr
Roseivirga spongicola
Brite
KEGG Orthology (KO) [BR:
rsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsr03032
]
T7867_07790
03400 DNA repair and recombination proteins [BR:
rsr03400
]
T7867_07790
Enzymes [BR:
rsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
T7867_07790
DNA replication proteins [BR:
rsr03032
]
Prokaryotic type
DNA Topoisomerases
T7867_07790
DNA repair and recombination proteins [BR:
rsr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
T7867_07790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WPZ12009
LinkDB
All DBs
Position
1770072..1771103
Genome browser
AA seq
343 aa
AA seq
DB search
MSSINMQKADIPKELVYVSSFDQEGFKREKTNDGFEYLDLQGKPVRDKAILKRIDELVIP
PIWEDVWICKNAKGHVQAVGYDLKGRKQYIYHPKWSEYRQQNKFSQLPLFAERLPIIRER
VAADLRKRGWPKERVLALTVKMLDEYYLRIGNLNYKRNNETYGLTTLRRKHLNDNGKSLS
LTYKAKSGKYRNVSVSNPTLAKLIRETSDLPGYEVFRYIDEDGKSQTIDSSDVNEYIKEL
SEGDFTAKVFRTWGGSRLSIDYLEDAKKDVEENPRRKIETALVQRVAKKLGNTVSICRDY
YIHPKVLEVVAQPEFKMPRISNAKKYQHLDTSEQVVLKILMER
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaataaatatgcagaaagcagatataccaaaagagctcgtctatgtgtcttct
tttgaccaagaaggtttcaaaagagagaagactaacgatggctttgaatacttggacttg
caaggaaagccggttagagataaagccattttaaagcggatcgatgaactggtaattcca
cctatttgggaagatgtgtggatttgtaagaatgctaaagggcatgttcaggccgttggt
tacgacctgaaaggcaggaagcaatatatttatcaccctaagtggagtgagtataggcag
cagaataagttttctcagcttccattatttgctgaaaggctcccaataattagggaaaga
gtagctgctgatttgcgtaaaagaggttggccaaaagagcgtgttctggcattaacagtg
aaaatgttagatgagtattatctccgaatcggtaacctaaactataaaaggaataatgaa
acctatgggctcaccacacttaggcgcaagcatttgaatgataatggcaaaagccttagc
cttacttacaaggccaagagtggaaagtatagaaatgtatcggtctctaacccaaccttg
gctaaactgattcgagaaacttctgacctgccaggatacgaagtgtttcgctacattgat
gaggatggtaagtctcaaacaatagattctagcgatgtgaacgaatacatcaaggaacta
tccgaaggtgattttacagctaaggttttcagaacatggggaggcagtcgcctttccatc
gattacctagaagacgcaaaaaaggatgttgaagagaaccctagaagaaagattgaaaca
gccttggttcagcgagtagccaaaaagctgggcaacacagttagtatttgcagagactat
tatatccacccaaaagtgttggaagttgttgctcaaccagaattcaaaatgccgagaatt
tccaatgccaagaagtatcaacatttagatacttcggaacaagtagtgctgaagatactg
atggagaggtga
DBGET
integrated database retrieval system
