KEGG   Roseivirga spongicola: T7867_08530
Entry
T7867_08530       CDS       T09626                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rsr  Roseivirga spongicola
Pathway
rsr00010  Glycolysis / Gluconeogenesis
rsr00020  Citrate cycle (TCA cycle)
rsr00260  Glycine, serine and threonine metabolism
rsr00280  Valine, leucine and isoleucine degradation
rsr00310  Lysine degradation
rsr00380  Tryptophan metabolism
rsr00620  Pyruvate metabolism
rsr00630  Glyoxylate and dicarboxylate metabolism
rsr00640  Propanoate metabolism
rsr00670  One carbon pool by folate
rsr00785  Lipoic acid metabolism
rsr01100  Metabolic pathways
rsr01110  Biosynthesis of secondary metabolites
rsr01120  Microbial metabolism in diverse environments
rsr01200  Carbon metabolism
rsr01210  2-Oxocarboxylic acid metabolism
rsr01240  Biosynthesis of cofactors
Module
rsr_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rsr_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rsr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rsr_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rsr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    T7867_08530 (lpdA)
   00020 Citrate cycle (TCA cycle)
    T7867_08530 (lpdA)
   00620 Pyruvate metabolism
    T7867_08530 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    T7867_08530 (lpdA)
   00640 Propanoate metabolism
    T7867_08530 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    T7867_08530 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    T7867_08530 (lpdA)
   00310 Lysine degradation
    T7867_08530 (lpdA)
   00380 Tryptophan metabolism
    T7867_08530 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    T7867_08530 (lpdA)
   00670 One carbon pool by folate
    T7867_08530 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rsr04147]
    T7867_08530 (lpdA)
Enzymes [BR:rsr01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     T7867_08530 (lpdA)
Exosome [BR:rsr04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   T7867_08530 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 HI0933_like DAO FAD_oxidored FAD_binding_2 NAD_binding_8 Lys_Orn_oxgnase FAD_binding_3 Amino_oxidase DUF7395 3HCDH_N Lycopene_cycl GIDA DUF1854 2-Hacid_dh_C
Other DBs
NCBI-ProteinID: WPZ12156
LinkDB
Position
1933074..1934468
AA seq 464 aa
MATKYDLIVIGSGPGGYVAAIRASQLGMKVGVVEKAELGGICLNWGCIPTKALLKSAQVF
EYIQHAADYGVKVDKASADFGAMVKRSRDVAQGMSKGIQFLFKKNKIDHISGFAKLKAGK
KVEVKAEDGSTTDYSAEHIIVATGGRSRELPNLPIDGEKIIGYRQAMVLEKQPKSMVVVG
SGAIGVEFAYFYNSIGTEVTIVEYMDRIVPVEDQEVSKQLERTYKKAGMKIMTNSEVTSV
DTKGKTCKVSVKTKKGEETLECDVVLSAVGVSTNLEGIGLEDVGVATDKGKVIVDDYYKT
NIPGIYAIGDIVHGPALAHVASAEGIICVEKIAGQNVEPLDYGNIPGCTYCQPEIASVGM
TEQAAKDAGYEIKVGKFPFSASGKAKAGGASDGFVKVIFDAKYGEWLGAHMIGANVTEMI
AEVVAARKLETTGHEIIKTVHPHPTMSEAVMEAAAAAYDEVIHL
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggcaactaaatacgacttaattgtaattggtagtggtccgggtggttacgtagcggca
atcagggcctctcaactcggtatgaaggtaggtgtggttgaaaaagctgagctaggtgga
atttgccttaactggggctgtattccaaccaaagccctattaaaaagtgctcaagtattt
gaatatattcagcatgctgctgactatggtgtgaaagtagataaggcttcggccgatttc
ggtgccatggtaaaaagaagtagagacgttgcccaaggcatgagcaagggtattcagttc
ttgttcaagaaaaataaaatcgatcatatttctggcttcgcgaagcttaaagcgggtaag
aaggtagaggtgaaggctgaagacggttcaactacagactattctgctgagcatattatt
gtggctactggtggtcgctcaagagagttgccaaacttgccaatcgatggagagaaaatt
attggctaccgtcaggcaatggtgctagaaaagcagcctaagtctatggtagtggttggt
tctggtgctattggtgtagagtttgcttacttctacaactcaattggtactgaagtaacc
attgttgaatatatggacagaattgttccggtagaagatcaggaggtttctaagcaatta
gaaagaacctacaagaaagctggaatgaaaataatgaccaactcagaagttacttctgta
gacactaaaggaaaaacttgtaaggtttctgtaaaaactaagaaaggtgaagaaacgcta
gagtgcgatgtagtactatctgctgttggagtttctaccaatcttgaaggaattggcttg
gaagatgttggcgtagcaaccgataagggtaaagtaattgtagacgactactacaaaact
aacatcccaggcatttacgctattggtgatattgttcatggtcctgctttagctcacgta
gcttctgccgaaggaattatttgtgtagagaaaattgcaggtcagaatgttgagccatta
gattacggtaacattcctggttgtacttattgccaaccagaaatagcttctgtaggtatg
actgaacaagcggccaaggatgcaggttatgaaatcaaagtgggtaaattcccattctct
gcttcaggaaaagctaaggctggtggagctagcgatggtttcgtaaaagtaattttcgat
gccaaatacggtgagtggcttggcgcacacatgattggtgccaacgtaactgaaatgatt
gctgaggtagtagcagctagaaagctagaaactactggtcatgaaatcattaaaacggtt
caccctcacccaactatgtctgaggctgtaatggaagcagctgcagcagcatatgatgaa
gtgatacatttataa

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