Roseivirga spongicola: T7867_08700
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Entry
T7867_08700 CDS
T09626
Name
(GenBank) tandem-95 repeat protein
Organism
rsr
Roseivirga spongicola
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Big_9
Cadherin_5
He_PIG
Cadherin_4
Cadherin
Por_Secre_tail
Ig_DAG1
HYDIN_VesB_CFA65-like_Ig
Cep192_D4
ASH
Cep192_D8
DUF1573
Cep192_D3
GBD_IRG7_N
DUF8694
Ig_CFAP65
Ig_CFAP65_7th
Ig-CFAP74_4th
Motif
Other DBs
NCBI-ProteinID:
WPZ12189
LinkDB
All DBs
Position
complement(1966275..1971038)
Genome browser
AA seq
1587 aa
AA seq
DB search
MLVLAINVQGQDENNDEALNKRLSTSSGGWVSGGIYTSHIAVGQNGVSTLLTATDGQTEY
KGNFGFIIPLIEQVEPNQAPIAVTAAKSVLYKLGETLKLNGFDPDGDEIDYVITQAPANG
ELAVSGTNKGRFTFNPNSDLTPATGYEDVIKFKVVEVNGEKLESEEATLTFKFNVVDEPH
EISSLSVSNATETSKSLDLEISDTRFNSVYSVKLSYLDLSTPTAPKTISIVNDAFNLESF
TKGDNSLATNIGVTQAEHPYLFSAEQVVIIAEVTTPKTGYNDDQVFVLENSTESGTGGAI
RNLDADSDLFADTRDEEAFVNSTSTDGLFFSFANEKQTPENTPVAVNLYALELGGFDLTT
ATVEITSSPESGTLSEPVLVKTSGNLIQWTAFYTPIGDVGYSDSFEFSVTSASRETTVNA
TASIEVIDVNDAPTLSAINNQLINEDEIGTVQLSYADVDNEVNITATSSEPSKVAVTVAN
GELTLTPIADYTGKVSISVLLEELDTEEAYSLFETFEVTVSPVNDSPIMAAIDDQNVDED
NVFTYTLSATDVDAAVPLFTYKATPDVQGAAIVDINGNIMTVTPTANYNGVINFSITADD
RLGTATSVSAVESFALTVNAVNDAPVSTATIPTQSMLDELPAYIIDMGNYFDDVETADED
LIITHNGAGSLFTLAVAGKNVTVTPISGQSGSEDVTFTVSDGELSVTQTVTFSVETESAD
ITTTGIQNVSVDEDFTTYTIDLSGVFTDNNDPNAVFNYTVGGLSQLSGTINGTNLEINTS
SDFNGSESVFLIASANGKSSFTSFDINVNPVNDAPTLGTTSGQSIQEDGQLAGVFMTFAD
IDTEATNLVFTATSSDESVITTDAIAISESASGITLSANTVANASGSTTITVNVFDGEFT
ATQTFDVTVLSVNDAPTVSATTIADATEDAAYTQSLAGLFADVDGDNLSYMLEGNPDWVS
VDNGSLVGTPTNDDVGSTDFYITADDGSGGTVRQQYSISVANTNDAPIVASAAADITATE
DVLLSSLIASSVFIDVDGDALTLSATFTGADWLTFDATNNRFTGTPANDDVGTVNITITA
TDSEGASVSDDIVLTIQNVNDQPTDLAISTLTVAENSATGTVVGSLSSTDVDAGDSFTYT
LVPGSGSDNNDLFSIANGELVTNGDIDFESTTNLSVRLRTTDVAGATFEKSFSITVNNVN
EAPTALASSSLSLDENAGADAEIGTLSTTDPDNGDSFTYSLVAGTGDSDNASFSINSGKL
LAKISLNFESKSSYSVRVKTEDAGGLSYEEALTITLNDVNEAPTAIAIDASYIDENVTVG
SVVGALSTTDEDNGDTFTYSLAAGTNDNDAFDIDGANLVTAAAVDFETKASYTVVVTSTD
AGGASFDKSITITVNNEAEPSIANIGGLVFDVTDIAETTSQNFTIENTGDTDIEVASITL
PDGYSADKSAFTVEVGASTQVEVTFAPSEAKTYAGEMVIQSNAGETRVNITGEGTIVTAI
DDDVIDADEVSLYPNPAQHMVTIDLSQIPQVQPNLAIVDMNGTAVWNKQKVQESKVEVNV
SSYPAGTYLIRISSEKGSAVKKLIIVK
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atgctagttcttgcaataaatgttcaaggacaagatgaaaacaatgatgaggcgctaaac
aagcgcttatccaccagcagtggtggttgggtgtcggggggtatttataccagccacatt
gctgtgggccaaaacggtgtaagtactttgctcaccgctactgacgggcaaactgaatac
aaaggaaactttggattcattattccactaatagaacaagtggagcccaatcaggcacca
atagccgtaacagctgctaagtctgtcctatataagttaggagaaactttaaagctaaat
ggtttcgatccagacggagatgaaatagactacgtgattactcaggctccggccaacgga
gaacttgcagtttcaggtaccaataaaggaaggttcactttcaaccctaacagtgacctg
acccctgccacaggatacgaagatgtaatcaagtttaaggtagtggaagttaatggtgag
aagctagagtctgaagaggccacgctcacatttaagttcaacgtagtagatgaaccgcat
gagatcagcagcttgtctgtgagtaatgcaactgaaacttcaaagtcgttagacttagaa
atatcagatactaggttcaattcagtttactcagttaaactaagctacttggatttatct
actccaacagcacctaagactatctctattgtgaatgacgcattcaacttggagagtttc
actaaaggtgataatagcttggcaaccaatattggagttactcaagcagagcacccatac
ttattcagtgctgaacaagtagttattattgctgaagtaaccactccgaaaacgggctac
aatgatgatcaagtatttgtactggagaatagtaccgaaagtggtactggtggagcaatt
agaaatttagatgctgactccgacttatttgccgatactagagatgaggaagcttttgtg
aatagcacatctacagatggattattcttcagctttgctaatgagaagcaaacgccagaa
aacactcctgtagccgttaatctctatgcacttgagctaggaggtttcgatttgactaca
gctactgtggaaatcacatcttctccagaaagcggaacgctctcagagccagttttagtg
aaaacgtctggaaacttgattcaatggacagccttttacactccaattggagacgtaggc
tacagcgactcattcgaatttagtgtaaccagtgcgtctagagaaaccaccgttaacgcc
acagcttctattgaagtaattgatgtgaacgatgctcctactctttctgccattaacaac
cagttaatcaacgaagatgagattggcactgtacaactgagttatgccgatgtagacaat
gaagtaaatattacagcaacttcatctgaaccatctaaagtagcggtaaccgtggcaaat
ggagagttaactctcacacctatagcagattatactggtaaggttagtatttctgtgcta
ttggaagaattagatactgaggaagcttattcgcttttcgaaaccttcgaagtaactgtt
tctcctgtaaacgactcgccaattatggctgccatagacgatcagaatgtagatgaagac
aatgtgtttacttatacactttcggctacagatgtagatgccgctgttccattattcacc
tacaaggccactccagacgttcaaggggctgccattgtagatattaatggcaacatcatg
acggtaactcctactgccaactataatggcgttatcaactttagcattactgccgatgat
aggctaggtaccgccacctcagtttctgcagtggagtcatttgcgcttacagtaaatgca
gtaaatgatgctcccgtttctacagctacaatccctactcaatctatgctagatgaactt
cctgcatacataattgatatgggtaactattttgacgatgtagaaacagctgatgaagac
ctcattataacgcataatggagcaggttcgctcttcactcttgctgtagcagggaaaaac
gttaccgtaacccctatttcaggtcagtcaggttctgaagatgtaacctttacggtgagt
gacggagaactttccgtaacgcaaactgtaacctttagtgtcgaaacagaaagtgcggat
atcacaactacaggcattcaaaatgtatcggtcgatgaagatttcacaacctacacgata
gatctttctggagtgtttacagataacaacgaccctaatgccgtgtttaactacactgtt
ggtggtttaagtcagttatctggcacaatcaatggtactaaccttgagattaacaccagt
agtgatttcaatggaagtgagagcgtattcctgattgcttctgccaacggaaaatcatcg
ttcacatctttcgacattaatgtaaatcctgtaaacgatgctcctactttaggaacaacg
agcggccaaagcattcaggaagatggacaactagccggagtgtttatgactttcgcagac
atagatacagaggccacaaaccttgttttcacagccacttcttccgatgaaagcgtgatt
accaccgatgctatcgctattagtgaaagcgcatccggcatcaccttatcggccaataca
gtagcgaatgcttcaggatctaccacaataacagtcaatgttttcgatggagagtttact
gcaacacaaacttttgatgtaactgtgctttcagtaaatgatgcaccaacggtaagcgca
acaactattgccgatgcaactgaagatgctgcttacactcaaagtttagctggccttttt
gccgatgtagatggagataaccttagctatatgctagaaggaaacccagactgggtttca
gtagataatggaagcctggttggaacacctactaacgatgacgtaggttctactgacttc
tacattacagcagacgatggttctggcggaacagtaagacagcagtattctatcagtgtt
gccaacacaaacgatgctccaattgtggcttctgccgcagcagacattacggctactgaa
gatgtattgctaagttcactaattgcttcttctgtatttatagacgtagatggtgatgca
cttaccttatctgctactttcactggagccgattggttaacatttgatgctaccaacaac
aggtttacaggtactcctgctaatgatgatgttggcaccgtgaacattacaattactgct
actgactcagaaggagcatcagtatcggatgatattgtacttacaattcaaaacgtcaat
gatcaaccaacagatttagctatctcgaccttaacagtcgctgaaaatagtgctactgga
acagtagttggctctctaagctcaacagatgttgatgctggcgatagcttcacctatact
ctcgttcctggtagtggttcagacaataacgatctattcagcatagctaatggcgagtta
gtgacaaatggcgatatagattttgaatctaccacaaacctgagcgttagacttagaact
acagatgtagctggagctacattcgaaaaatcattcagcataacggtcaataatgtaaat
gaagcacctacagcactagcttctagcagcttatcgcttgatgagaatgcaggagccgat
gccgaaattggaacgctaagtactacagacccagataatggagattcatttacttatagt
ttggtagctggtactggcgactcggacaatgcgagcttcagcataaacagtggaaaactc
ttagctaaaattagcctcaactttgagtctaaatcttcttactcagtgagagttaaaaca
gaagatgctggaggtttatcttatgaagaagcactcaccattacattgaatgatgtaaat
gaagccccaacagctatagctatcgatgcctcctatatagatgaaaatgtaaccgttggt
tccgttgttggagcactgtctacaacagatgaagacaatggagatacgtttacttatagc
cttgctgcaggcaccaatgataacgatgcgttcgatattgatggcgccaatttagttact
gctgcagcagtagactttgaaaccaaggcaagctatacggtagtggttacatctacagat
gccggtggtgcaagcttcgacaagtccatcaccataacggtaaacaatgaggccgagcct
agcattgccaatattggtggcttggtgttcgatgtaaccgatattgctgaaactacttct
cagaacttcactatagagaatactggtgatactgacatagaagtagccagcattacttta
cctgatggctactcagcagataaatcggcctttactgtagaggtaggagcctcaacgcaa
gtagaagtaacctttgctccatctgaagccaaaacttacgctggcgaaatggtaattcaa
tcaaatgcgggagaaaccagagtaaatattactggtgaaggtactatagtaacagctatt
gatgatgatgttattgatgctgatgaagtaagcctttaccctaaccctgctcagcacatg
gttaccatagacctgtctcaaatacctcaggttcagccgaacttggccatagtagacatg
aatggcacagccgtttggaataagcaaaaggtacaagaaagcaaggtagaagtgaacgta
agctcataccctgctggcacctacctgatccgaataagctcagaaaaaggtagcgctgtt
aaaaagttgatcattgttaaataa
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integrated database retrieval system
