Roseivirga spongicola: T7867_08810
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Entry
T7867_08810 CDS
T09626
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rsr
Roseivirga spongicola
Brite
KEGG Orthology (KO) [BR:
rsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsr03009
]
T7867_08810 (rimO)
Enzymes [BR:
rsr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
T7867_08810 (rimO)
Ribosome biogenesis [BR:
rsr03009
]
Prokaryotic type
ribosomal protein modification factors
T7867_08810 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
DUF5005
Motif
Other DBs
NCBI-ProteinID:
WPZ12407
LinkDB
All DBs
Position
complement(1995334..1996650)
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AA seq
438 aa
AA seq
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MKVKGLKKDKVNIVTLGCSKNLVDSEVMLTQLKGNGIKTTHESKKDDANIVIINTCGFID
NAKQESIDTILRYVDAKEEGLVEKVYVTGCLSHRYKDDLEKEIPQVDAFFGTMELPALLK
KFKADYKHELLGDRITTTSSHYAYLKIAEGCDRPCSFCAIPLMRGGHKSRPIEELVTEAK
NLAKNGTKELLLIAQDSTYYGLDLYKKRNLAELMQRLSDVEGIDWIRLHYAFPTGFPMDV
LDVMAERPNICNYLDIPLQHGSTNMLKLMRRGTTREKTEALLAEMRSRVPDIAIRTTLIA
GHPGETEEDFADMVDFVEKSRFDRLGIFTYSHEENTHSYSFTDDVPDEVKQERANHVMQI
QEEISNEINQAKIGKTFKVLIDRKESGSFIGRTEHDSPEVDNEVYIDAKKHYLRVGDFAE
IKITDATEFDLYGEPAQG
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttaaggggctgaagaaagataaagtcaatattgttacactaggttgctcaaag
aacttagtggattctgaagtaatgttgactcaactgaagggaaatggaattaaaaccact
cacgagtctaaaaaagatgatgctaacattgtcatcatcaacacttgtgggtttatagac
aatgccaagcaggagtctatagacaccattcttagatatgtggacgctaaggaagaaggg
ctggtagaaaaagtttacgttactggctgtctttcacaccgctataaagacgacctagaa
aaggaaatccctcaggtagatgccttcttcggcactatggagttgccagcgcttttgaaa
aaattcaaagccgactataagcacgaacttttaggcgacagaatcaccacaacatctagt
cattacgcttatttgaaaattgctgaaggatgtgacagaccttgctctttctgtgctata
cctttaatgcgtggcggacataaatcaagaccaattgaagaattggttaccgaggctaaa
aatttagccaagaacggaaccaaggagcttttattgatcgctcaagattctacctactac
ggattagacctttacaaaaagagaaatcttgctgagctaatgcagcgcctttcagatgtt
gaaggcattgattggatcaggctacattacgctttcccaacgggtttcccaatggatgtg
ctcgatgtgatggccgagcgtccaaatatttgcaactacttagacattccacttcaacat
ggttcaaccaatatgttgaagcttatgcgaagaggtactacaagagagaaaactgaggcc
cttttggccgaaatgagatctcgagtacctgatatagccataagaactacgctgattgct
gggcacccaggagaaactgaagaagactttgccgacatggtagactttgttgaaaagtca
cgtttcgatcgcttgggaattttcacctattcacacgaagaaaatacccattcatatagt
tttactgatgatgttcctgatgaggtgaaacaagagcgtgcaaaccacgtaatgcagatt
caagaagaaatttcaaacgaaatcaatcaagcaaagatcggcaagacctttaaggtacta
attgaccgaaaagaaagtggcagctttattggcagaactgaacacgactcgccagaagtt
gataatgaggtttatattgatgctaaaaagcactacttaagagtgggtgatttcgctgaa
attaaaattactgatgctactgagttcgacctatatggtgaaccagcacaaggataa
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