Roseivirga spongicola: T7867_09215
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Entry
T7867_09215 CDS
T09626
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
rsr
Roseivirga spongicola
Brite
KEGG Orthology (KO) [BR:
rsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsr02000
]
T7867_09215
Transporters [BR:
rsr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
T7867_09215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
WPZ12289
LinkDB
All DBs
Position
2087859..2089271
Genome browser
AA seq
470 aa
AA seq
DB search
MKKYFITTLCLIAILATSCSDLLETEPRQSVSIDGALESPDVLNALLIDVYNSFQGGGTL
GSEWIVVPEVMADNFTFNNNRGTYNGQYNNVLRSHLTAWEVYGYLLQLNVVIEGGAVLDD
NTLGEAYALRALGYLYLMNTYAYMPTAIVGSQNKGGVPLITEAVLDLADVTLPARASIDE
VYDFMLADVAQAISLMDNSRSNARFTQAGAQALGSRIALYAGEYALSVQYAQAAIDAGTA
SLSTRDNYVSDWAQFQHPEAIWYLEYQSNENQGPNTSVMSIYITDGTVITPDYRGNGDFT
PAQEVLDLLGPTDVRNGLIEEVQTSNLPNPVGTPELKKYIDNGGQGNLTNIPIFRISEMY
LNIAEAEARLGNTLQAQAALQTLKRRSVSPTYIVTNTGQDLIDEILVERRLELLGEGHRF
FDLKRLGMDIDKSAVDLTGEVISFDDARILAPLPSGDLELNPNLENNFGY
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatattttataactacactttgcttaatagctattctagccacttcgtgttca
gatttgctagaaacagagccaagacaatctgtctctattgacggtgcgttagaatcacca
gatgtgcttaatgcactcttgattgatgtttacaatagttttcaagggggcggaaccctt
ggtagtgagtggattgttgtgccagaagtaatggccgataactttactttcaataataat
agaggtacctataatggtcagtacaacaatgtgttaagatcacaccttactgcgtgggaa
gtatatggttatttgcttcaactaaacgtggttattgaaggtggggctgttttagatgat
aacactttgggtgaggcatatgcgttgagagcattaggttatttgtacctaatgaatact
tatgcttacatgcctactgcaattgttggctcacaaaacaagggtggtgtacctttgatt
actgaggctgttttagatcttgctgacgtaactctgcctgcaagagctagtattgatgag
gtttatgacttcatgttggcagatgtagctcaagcgattagtctaatggataactctaga
tctaacgctaggtttactcaagcgggtgctcaagccttaggttcaagaattgcgctttat
gctggagagtatgctttaagtgtacaatatgctcaggctgctatcgatgcaggtacagcg
tctctttcaaccagagataactacgtgagtgattgggctcagtttcagcatccagaggct
atttggtatctagagtatcagtcgaacgagaatcaaggaccaaatacttctgtaatgtca
atttatattactgacggaactgtgatcactccagattatagaggaaatggtgatttcact
ccagctcaagaagtgttagacctattaggtccaaccgatgttcgtaatggtttaattgaa
gaggttcaaacctctaatctacctaaccctgtaggaactccagagcttaaaaagtatata
gataatggcggacagggtaaccttacgaatattccgatcttcagaatttcagagatgtat
ttgaatattgctgaggccgaagctagattaggtaatactctacaggctcaggctgcactt
cagacattgaagagaagatcagtttccccgacttatattgtcactaatactggtcaagac
cttatcgatgaaattttggtagagagaagactagaactattaggagaaggtcatagattc
tttgatctaaagagattaggaatggatattgataagagcgcagttgatttgactggtgaa
gttatcagtttcgatgatgctagaattttggctcctcttccgagtggtgacttggaattg
aatcctaatcttgagaacaattttggttactaa
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