Roseivirga spongicola: T7867_09620
Help
Entry
T7867_09620 CDS
T09626
Name
(GenBank) lipid A deacylase LpxR family protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
rsr
Roseivirga spongicola
Pathway
rsr00540
Lipopolysaccharide biosynthesis
rsr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
T7867_09620
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rsr01005
]
T7867_09620
Lipopolysaccharide biosynthesis proteins [BR:
rsr01005
]
Lipid A
T7867_09620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
WPZ12361
LinkDB
All DBs
Position
2186957..2187916
Genome browser
AA seq
319 aa
AA seq
DB search
MRFLKAIAVASFLISINLSAQVEFRNKEVSITNENDVYLLMNFDKYYSNGVFLNYRWSPR
EDSTKGGVKRVYTLGLSHRFWTPQDVTITRSQFYYRPYAGMLNVSYRDASFYGENSRLMY
GVDAGVTGKPSGAQAFQEGYHNLFGFPDPEGWDTQISTGFVADFKLEFNYQFQLIPSEID
LVTSTSGSLGNAFTNLRQRVDLRFGNLKSLRHSSFFNALIGEGSDAIEKHSYFFAGYGIE
AVGHNVTIEGHVFDDDSPITEEIVPWVRHLRLGFVTNTQHSTFRVLYNWLSREVKTRAGR
HSYISFQLDLRLPFKGVTP
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttctcaaggcaattgctgtagcatcttttctcatttctataaatctatccgct
caggttgagttccgtaataaggaggtgtctatcactaatgagaatgatgtgtacttgcta
atgaatttcgataagtactattctaatggtgtgtttctgaattacaggtggtctccaaga
gaggattctacaaaaggtggggttaagcgagtttacaccctaggcttatctcacaggttt
tggactccccaagatgttaccatcacgagaagtcaattttattatcgcccatacgcgggt
atgcttaatgtgtcgtaccgagatgctagcttttatggtgaaaactcaaggttaatgtat
ggtgtagatgctggagttactggtaagccatctggggcacaggcatttcaagaaggttat
cacaacttatttggctttccagatcccgaagggtgggatacgcagatttctacgggtttc
gtggctgatttcaaactagagtttaattatcaatttcaactcataccttcggagatagac
cttgttacatctacttctggatcactaggcaatgcatttaccaacttaaggcagcgtgta
gacttaaggtttgggaatcttaaaagccttaggcatagttccttttttaatgccctgatt
ggagaaggtagcgatgccattgaaaagcatagctacttctttgctgggtatggaattgag
gctgtgggccataatgtaaccatagaaggacatgtttttgatgatgatagcccgataact
gaagaaattgtgccgtgggttcgccatttaaggcttgggtttgtaactaacacccaacat
agtacatttcgtgtattatataattggttgagtagagaggttaagaccagggccggcagg
cattcttatatatcttttcagttagacctcaggttaccttttaagggcgttactccttaa
DBGET
integrated database retrieval system
