Roseivirga spongicola: T7867_10310
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Entry
T7867_10310 CDS
T09626
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rsr
Roseivirga spongicola
Pathway
rsr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rsr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
T7867_10310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsr03021
]
T7867_10310
03400 DNA repair and recombination proteins [BR:
rsr03400
]
T7867_10310
Enzymes [BR:
rsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
T7867_10310
Transcription machinery [BR:
rsr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
T7867_10310
DNA repair and recombination proteins [BR:
rsr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
T7867_10310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
WPZ08651
LinkDB
All DBs
Position
2330603..2331592
Genome browser
AA seq
329 aa
AA seq
DB search
MSILAFQIPEKVVMEKADDFHGLFTFKPLEKGYGVTIGNALRRILLSSLEGYAITGIKIP
GVLHEFSTIEGVVEDVSEIILNLKKVRFKKISDTVDNKINVVIDGQDKFTAGDIGKFTSA
FEILNPEDVVCHIDNDIKFEIELTIEKGRGYLPAEENKPSEQVFGFIPIDAIFTPIKNVK
YSVENTRVEQKTDYEMLVLDIKTDGSIHPENALKGAAHILIQHFMLFSDQNMILETGALD
EPEQVDEEMLHMRKLLKTSLNDLDLSVRAYNCLKAADVRTLGDLVKLEISDMMKFRNFGK
KSLAELEQLVAEKNLTFGMDLAKYKLEED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatactcgcatttcaaatcccggagaaagtggtgatggagaaggcagacgatttt
cacggtctgttcacgttcaaaccccttgaaaaaggctacggggttactatcggtaatgct
ttgagaagaatattgctttcttctctagagggctacgccatcaccggtatcaaaatacct
ggtgtgttgcacgagttctctactattgaaggtgttgtagaagacgtatcagaaatcatc
cttaacctgaagaaagtaaggttcaagaaaatctctgatacagtagataataaaatcaat
gtcgtaatagacggtcaggataagtttacagctggtgatattggaaaattcaccagcgct
ttcgaaatcttgaacccagaagatgttgtttgtcacatagacaacgatatcaaattcgag
attgaattgactatcgagaagggtagaggttaccttcctgcagaggaaaacaagccaagc
gaacaagttttcggattcattccaatcgatgctattttcacacctattaagaatgtgaaa
tacagcgtggagaacacaagggttgagcaaaagactgactacgaaatgttagttttagac
atcaaaactgatggttctattcaccctgagaatgcattgaaaggtgctgctcatatcctt
attcaacacttcatgttgttctctgatcagaatatgatcttagagacaggagcattggat
gagccagagcaagtagacgaagagatgcttcacatgcgtaagttgcttaagacttcattg
aacgatctagatctttctgtgagagcttacaactgccttaaagctgctgatgttcgtaca
cttggcgacttggtgaaattagagatttctgacatgatgaagttcagaaacttcggtaag
aagtctttggccgagttggaacaacttgtagctgaaaagaaccttaccttcggtatggat
ttggctaaatataaactggaagaggattaa
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