Roseivirga spongicola: T7867_13520
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Entry
T7867_13520 CDS
T09626
Symbol
ddlA
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rsr
Roseivirga spongicola
Pathway
rsr00470
D-Amino acid metabolism
rsr00550
Peptidoglycan biosynthesis
rsr01100
Metabolic pathways
rsr01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rsr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
T7867_13520 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
T7867_13520 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
T7867_13520 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rsr01011
]
T7867_13520 (ddlA)
Enzymes [BR:
rsr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
T7867_13520 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
rsr01011
]
Precursor biosynthesis
Amino acid ligase
T7867_13520 (ddlA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
GARS_A
Motif
Other DBs
NCBI-ProteinID:
WPZ09277
LinkDB
All DBs
Position
complement(3021529..3022599)
Genome browser
AA seq
356 aa
AA seq
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MSKLNLAIIFGGKSTEHEISILSAKSILKHLDRSAFNLSVIKIDTAGHWWLIDESNLDED
AAGEPVTLVPGSPKAQLISLKNGSVVETLDVAFPVLHGVFGEDGTIQGYFKMVDLAFVGC
DVLAASSCMDKDVTKRLLRDAGINIAPYLMATDNRIPSFEQVESELSIPVFIKPANLGSS
VGVYKVKTKAEYDEKIKMALTYDHKVLIEQLIVGKEVECSVLGNEEPKASLPGEIVTNTD
FYDFESKYVDSNASKTQIPASITEEQISEVRSVAVKAYQTMGCQGLARVDFFVTVDGEIL
INEINTLPGFTNISMYPKMWEATGIGYSELLSLLIELAINKHKSDASLNVKAREVK
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaactgaacctcgccatcatttttggcggcaaatctacagagcacgaaatctct
atactttcagcgaaaagtattcttaaacacttagatagaagtgccttcaacctaagcgtc
attaaaatcgatactgccggccattggtggttaatagatgaaagtaatcttgatgaagat
gctgctggtgaacctgtcactttagttcctggcagcccgaaagctcagctcatttctctt
aaaaatggttcagtcgttgagacgttagatgtggccttccctgtgcttcatggtgttttt
ggtgaggatggaactattcaaggctactttaaaatggtagacctggcctttgtgggttgt
gatgtattggctgcttctagttgtatggataaagatgtgaccaaacgactgttgagagat
gcgggtatcaacatagctccttatcttatggctacagacaatcgcattccttctttcgaa
caagtagaaagtgaactctcaataccagttttcataaagccagctaatttaggctcttct
gtgggtgtctataaggtaaagaccaaagcagagtatgatgagaaaataaaaatggcgctc
acctatgatcacaaagttctaatagaacaattaatcgtaggcaaagaagttgaatgctct
gtactgggaaatgaagaaccgaaagcctctcttccaggtgaaattgtaaccaacaccgac
ttttatgatttcgagtctaagtatgttgattctaatgcttcaaaaacccaaatacctgct
tctattaccgaagagcaaatcagcgaggtaaggtctgttgctgtaaaagcttaccaaacc
atgggctgtcaaggcctagccagagttgacttttttgtaactgtagatggagaaattctg
atcaacgaaatcaatacacttcctggtttcacaaacatcagtatgtatccgaaaatgtgg
gaagccactggtataggatactcagaactcttgagtttactcattgaattggctattaac
aagcataagagcgatgcctctttaaacgtgaaagcaagagaagtaaaatga
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