Roseivirga spongicola: T7867_14800
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Entry
T7867_14800 CDS
T09626
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rsr
Roseivirga spongicola
Brite
KEGG Orthology (KO) [BR:
rsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsr03016
]
T7867_14800
Enzymes [BR:
rsr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
T7867_14800
Transfer RNA biogenesis [BR:
rsr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
T7867_14800
Prokaryotic type
T7867_14800
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
NADAR-DarT1
Motif
Other DBs
NCBI-ProteinID:
WPZ09531
LinkDB
All DBs
Position
complement(3300619..3301401)
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AA seq
260 aa
AA seq
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MKANFYYIVHIQYLGYRFHGWAKQPNVKTVHYMIDRTLTFVMGQQWFKTLGASRTDAMVS
ANHAAFELFLKEPIEDISEFTALFNKNLPPDIKVLKIEETDRHFNIINTPKQKEYIYLFS
FGQKAHPFSSPFISTFLDTLDLELMKQGAKVFEGNHDFRAYTKKPAQEKVTTRLIEKSEI
VRNEYHQASFFPSPSYAYVVQGKGFMRNQIRMMMGQLIRLGRNEIDLDYLESSLKTGFPD
HLSLVAPASGLVLNEVKFYH
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccaacttttactatatagtgcacatacaatacctcggctatcggtttcatggc
tgggccaagcagcctaacgtaaaaaccgtacattatatgatagaccgaaccctcactttt
gtgatgggacaacaatggttcaaaaccttaggagcaagcagaaccgatgcgatggtttcc
gctaaccatgcggccttcgagctctttctaaaagaaccaattgaagacatatctgagttt
acagctttattcaacaagaatctccctcctgatattaaggttcttaaaatagaagagaca
gataggcactttaatattataaacaccccgaaacagaaagaatacatctatctattttca
tttgggcaaaaagcccacccattctcctctccattcatcagcacttttttagatacgcta
gacttagagcttatgaagcaaggtgcaaaagtttttgagggtaatcatgactttagagct
tacactaaaaaaccagctcaagagaaagttactaccagattgattgaaaagtctgagatt
gttcggaatgaatatcatcaagcgagcttctttcctagtccatcttatgcctatgtggtg
cagggcaaaggctttatgcgcaaccaaatccgtatgatgatgggacaactaatcagactg
ggaagaaacgaaatcgatttagactacttagaatcgagcttaaaaactggctttccagat
cacctaagtttagtggctcccgcctctggtttagttctgaatgaagtaaaattctatcat
taa
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