Roseivirga spongicola: T7867_16945
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Entry
T7867_16945 CDS
T09626
Name
(GenBank) UvrD-helicase domain-containing protein
Organism
rsr
Roseivirga spongicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
WPZ09954
LinkDB
All DBs
Position
complement(3830848..3833970)
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AA seq
1040 aa
AA seq
DB search
MALTVYKSSAGSGKTFTLVKEYIKLLIANPQDYRHILAITFTNKATEEMKSRILRNLEEL
ASGETSDLEKVLISEFEGRFDVSQIAARANEAYDLIIHNYSRFEVSTIDSFFSRVLKSFA
RELNLPLSYEVEMNQDLALNETIDNLFRELDDQPEIKNWLTQYSKDQVENDKSWNVDQQI
QKLGKNLFKEEFQDGFNDQKVELASLKNLIESLKKEIKTFEKTAKSFANKAFEVLSQNGL
TAADFHYGTSGAIAAFYALDKGDFEIDTKKRFLQTLDGEMQWGAKKSPNFELACQLGESD
LHYIGTDALAFVTKERKHYNTARAILKNIYAFGLLESLHQKLKDYRDEHNVMLISDTNII
LKEVLREADAPFIFEKLGSFYKHIMIDEFQDTSNFQWFNLKPLIINALSEGHEVLIVGDV
KQSIYRFRGGNMRLLLSQIKEELGLFYPNEADRNLSDNYRSLSEIVNFNNALFDRLPSAL
RENDSLTESNLFELAFEGHAQDIKKQKGGFVNMKFFEAEGWKDLAIDNLVENIRQNQDKS
YGLKDMLILVNRNSEISDVANRLMLEQIPFINGDSLKLQQSDLVMFVLELLGYLQSGKDE
VQTLSLIILYKRLTGQDYSEALLTSKKQRLTLEKAGFPPEFTQQTHSLKQQSLFDLVCVL
LIIFDLKESADIYLQQLLDLVLEQTQKGRNSIASFLEWWEKEGENQTVSTSEQTNAIRIL
SIHKSKGLESPIVFIPFTSWDLLPRPTIHQFWTKHVPPEYAELKYIPLDFSKGLLTDSYF
ENDYYKEAEESALDILNKTYVAFTRPREKLYLSAPQTKPGTAQIHQLMIGLLEEAGLQKS
EESDYIQFSLGEDHVKVGKAETHQASEVLKIYPATSFLDQLSIRNDSDRFFMLQETEQAK
NITLGNQVHDVLSEIRVREDLPIVLRQRLQSGEMSREVVNQVEERIEKLFAQEQIDAWFS
DEYEVYNERSIWFEGREHQPDRLLFKGNEAVVIDYKKEIESDSHHAQVHRYMRAIQAMGF
EKVSGYLIYVEPVLVKEVER
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
ttggctttaactgtttacaaatcatctgcaggttcaggaaagacctttacgctagtaaaa
gagtacatcaaactactgattgctaaccctcaggattacaggcatattctggctattact
tttaccaataaggcgactgaggaaatgaaatctcggattcttcggaatctggaagaacta
gcatcgggcgaaacttctgatttggagaaagtcctgatttctgaattcgaaggaaggttc
gatgtaagtcagatagctgccagagcgaatgaagcctacgacttgatcattcacaactac
agccgttttgaggtttctaccatagatagtttcttttccagggtgttgaagtcctttgct
agggaactgaatttgcctttaagctatgaggtggaaatgaaccaagatctcgccttgaat
gaaaccatcgataacctgttccgagagctggacgatcagcctgagatcaaaaactggctc
actcagtattctaaagatcaggtcgaaaatgacaaaagctggaatgtagaccagcagatt
cagaagttaggaaagaacctctttaaagaggagtttcaagatgggttcaacgaccagaag
gttgaattagcctcgctgaaaaacctgattgaaagcttaaagaaagaaatcaaaaccttt
gagaaaacagctaaatcatttgcgaataaagcctttgaggtgttgagtcaaaacgggttg
actgcggcagattttcattacggaacgtcaggagccattgccgctttctatgcgctggat
aaaggcgactttgaaatcgacacgaagaagaggtttcttcagacactggatggagaaatg
cagtggggagccaaaaagagtccaaattttgaattggcctgtcagctaggagaatccgac
ttgcactatatcggaacagatgctttggccttcgtcactaaagaacgaaaacattataat
acggccagagccattctcaaaaatatctatgcttttggtttgttggaatcgcttcatcaa
aaactaaaggactatcgcgatgagcacaatgtgatgctcatttctgataccaatatcatt
ctcaaagaagtgcttcgcgaagccgatgctcctttcatctttgagaaactcggaagtttc
tacaaacatatcatgatcgatgagtttcaggacacttccaacttccagtggttcaaccta
aaaccgttaatcatcaatgccttgtctgaggggcatgaagtgctgattgttggggatgta
aagcagtcaatttatcgtttcaggggaggaaacatgcgactgctcttgagtcagattaaa
gaagaattggggctgttttatccgaatgaagcagatagaaacttatcagacaactatcgc
agcttaagcgagattgtcaatttcaacaatgcacttttcgatcggctgccttctgcgtta
agggagaatgactcactgaccgaaagcaacctttttgagttggccttcgaaggtcatgct
caggatattaagaagcaaaaaggtggctttgtaaatatgaagttctttgaggcagagggc
tggaaggacttggctattgataacttggtagagaatatcaggcaaaatcaggacaaaagc
tacggactgaaagatatgctgattctcgtgaatagaaatagcgaaatctcagacgtggcc
aaccgattgatgctggagcaaattccattcatcaatggtgattcgctaaaactacagcag
agcgatttggtcatgtttgtgctcgaattgctaggctatttgcagtcaggaaaagacgaa
gttcagacactaagtctaatcatcctttacaagagattaacaggtcaggattattcagaa
gccttactaacttccaaaaaacaaagacttaccttggaaaaagctggttttccaccagaa
tttactcagcagactcattccctaaaacagcagtcgcttttcgacctggtttgcgtgctc
ctgatcattttcgacctgaaggagagcgcggacatctaccttcaacagttgcttgattta
gtgttggaacagacccagaaaggccgaaactccatcgctagttttctcgagtggtgggag
aaggaaggagaaaatcagaccgtaagcaccagcgagcaaaccaatgccattcggattctt
tcaattcacaaatcgaaaggtctagagtcgccaatcgtttttattccattcaccagttgg
gatttgctcccaaggcctaccatacatcaattctggaccaagcatgtgccgccagaatat
gctgaactgaaatacattcctttagacttcagtaagggactccttacagactcctatttc
gaaaacgattattataaagaggcagaggaaagcgctttggatattctcaacaagacttat
gtggcttttaccagacctagagaaaagctctacttatcggcaccacaaaccaagccagga
acagctcaaattcatcagttgatgattggtttgctggaagaagcaggtttgcagaagtcg
gaagaatctgattacatccagttttccctaggtgaagatcacgtgaaggttggaaaggca
gaaacgcatcaagcgagtgaggttttgaaaatatatcctgcaacctcatttctcgatcag
ctgtccatccgaaacgactcggaccgattctttatgcttcaagaaacagagcaggccaag
aatatcaccctcggaaatcaggtgcatgatgtgctgtcagagatccgtgtgagagaagat
ttgcctattgttctcaggcaaagactgcagtcaggtgaaatgagtagggaggtggtaaac
caagtggaagaacggattgaaaaattgttcgcgcaagagcagattgacgcttggttttcg
gacgaatatgaagtctacaatgaaagaagtatttggttcgaagggcgggagcaccaacca
gatcgattgctcttcaaaggaaatgaagcagtagtgatagactacaaaaaggaaattgaa
agtgatagccaccatgctcaagtgcatcgatatatgcgagccattcaagccatgggcttt
gaaaaggtttctggttatctaatttatgttgaacctgttttggtgaaggaggtggagaga
tga
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