KEGG   Roseivirga spongicola: T7867_17310
Entry
T7867_17310       CDS       T09626                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rsr  Roseivirga spongicola
Brite
KEGG Orthology (KO) [BR:rsr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rsr03400]
    T7867_17310
Enzymes [BR:rsr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     T7867_17310
    5.6.2.6  RNA 3'-5' helicase
     T7867_17310
DNA repair and recombination proteins [BR:rsr03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    T7867_17310
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII SecA_DEAD DEXQc_Suv3 AAA_19
Other DBs
NCBI-ProteinID: WPZ10027
LinkDB
Position
3932986..3935424
AA seq 812 aa
MKTQKDLSPALNWFNSKGWQAFDFQQQCWSAYLHCKSGLLNAPTGSGKTYAIWLACVLQA
LQNPKKAKGLQVIWVTPLRALAKDIHSAMSTCCREMGLDWEIGLRTGDTSQKERQAQTKN
MPQALVTTPESIHVLLAQKNAPKTFANLKAVIVDEWHELVGSKRGVQMELALAYFRHLNP
KPIQTWAVSATIGNLEEAAKVLLGDQYEQCEIVKAKIDKKIEVETILPDSVDTLPWIGHL
GLNMLPRITPILDEHTSTLLFTNVRSQTEIWYKTIIEKVPDLMGLVAMHHGSLDLQVRQW
VEEAIHAGKLKCVVCTSSLDLGVDFRPVDMVIQVGGPKGVARFFQRAGRSGHRPGATSKI
YFLPTHSLELIEAAVLKEAIATHQFESRTPLLLCYDVLVQYLVTLAVGPGFYPDEVRAHV
QSTNAYKDLTDQEWQWCLEFISTGGNSLSAYDEFAKVEIMNDGLWKVNNRKTAMRHRLSM
GTIVGDPVVKVKYTSGTYIGTVEESFIAQLKEGDTFWFAGKNLALVRFKDLTAQVRNSKK
KTGPIPRWGGGKASFTSLLSDQLRRKIHDASISKFEGVEMKTIAPLLEKQARLSALPKEN
ELLIEQIKSDEGTHIYFYPFEGKYVHEVLAALVAYRISVSQPISFSIASNDYGFEVLTDL
DIEIEDFLELDLFSMENLLDDIKASINNTEMAKRKFRDIATIAGLIFQGYPGKGMTYKHL
QASSTMIYKVFEDYDPENLLLKQAHEEVLSLQFERSRLTESLERINKQTILLKKLSKPTP
FCFPIMVDRLRERFTTEMLSERIEKMQLDFQT
NT seq 2439 nt   +upstreamnt  +downstreamnt
ttgaagactcaaaaagatttaagccctgcccttaattggttcaactcaaaaggttggcaa
gccttcgattttcagcaacaatgctggagtgcctatctacattgcaaaagtggactgctt
aacgccccaaccggaagcggaaaaacctacgccatttggttagcctgcgttctgcaagcg
ctgcaaaaccctaagaaagctaaaggcctgcaagtaatttgggtaactccgttaagagca
ctagccaaagacattcattcagcaatgagcacctgctgtcgcgaaatgggcttagactgg
gaaattggcctaagaacgggcgataccagccaaaaagaaaggcaagctcaaaccaagaac
atgcctcaggcgctggttaccacacctgagagtattcatgtgctattagcacagaaaaat
gcaccaaaaactttcgccaacctcaaagctgtcattgtagatgaatggcatgaactggtg
ggaagtaaaagaggcgttcagatggagctagcactagcttacttcaggcaccttaacccc
aaaccaatccaaacttgggcagtttctgcaaccattggcaacctagaagaagccgcaaaa
gtgcttttgggtgatcaatatgaacagtgcgaaattgtaaaagccaaaatcgacaagaaa
attgaggtagaaaccattttaccagactccgtagatacgcttccgtggattggtcatttg
ggactgaacatgctaccgagaataactcctattctcgatgaacatacttctactctatta
ttcaccaatgttcgatcgcagaccgaaatttggtacaaaaccataattgagaaagtacca
gatttaatggggcttgtcgccatgcaccacggttctttagacttgcaggtaaggcaatgg
gttgaagaagctatccatgctggtaaactcaagtgcgtagtttgtacctcgagtttagac
ttaggtgtagactttaggcctgtagatatggtcatacaagtaggcggacctaaaggcgta
gcccgtttttttcagcgggcaggaagaagcggtcatcggccaggcgcaacgagtaaaata
tacttcttgccgacacactctcttgaattaattgaagcagctgtactcaaagaagccatt
gcaacccatcaattcgaaagtagaacaccactcctactttgctacgatgtactcgtacag
tatttagtcacactagcagttggcccaggtttttaccctgacgaagtgagagctcatgtt
caaagtaccaacgcctacaaagacctaaccgaccaagaatggcaatggtgtttagagttt
atctctactggagggaactcacttagtgcctacgatgaatttgccaaagtggaaattatg
aatgatggactgtggaaggtgaataaccgaaaaacagccatgcgacatagactttctatg
ggtactattgtaggcgacccagtagtgaaagtcaaatacacatctggcacatacattggc
acagttgaagaatcatttattgcccaactcaaagaaggagataccttttggtttgcaggg
aagaacttggccttggttaggtttaaggacttaacggcccaagtaaggaattcgaagaag
aaaacaggtccaattccacgttggggaggtggcaaagcctcgtttacttcgctcctttct
gatcaacttagaagaaagattcacgatgcctctatttcaaagttcgaaggagttgaaatg
aagaccattgcacctttgctagagaagcaagcaagactttcagcacttccaaaagagaat
gaattactcatagagcaaataaaatctgatgaagggacacacatctacttctaccctttt
gaaggtaaatatgtacacgaagtactggctgctttagtagcttatagaatttcagtaagc
caacctataagcttttccattgcctcaaatgactacggttttgaagtactcaccgattta
gatattgagattgaagattttcttgagctagatctgttttcaatggaaaacttactagat
gatattaaggcgagcatcaacaacacagaaatggccaagcgaaagtttagagacatcgct
actatcgctgggctcatctttcagggctacccgggcaagggaatgacctacaaacacttg
caggcatcatctaccatgatctataaagtttttgaagattatgaccctgagaacttactg
ctcaaacaggcgcatgaagaagtactgagccttcagtttgaaaggtctagacttaccgaa
tctttagaacgcattaacaagcaaactattctattaaagaaactgagcaaacccactcct
ttctgcttcccaattatggtcgataggttacgcgaaagattcactacagaaatgctttct
gagcgaatagagaaaatgcagctagactttcagacataa

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