Roseivirga spongicola: T7867_18655
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Entry
T7867_18655 CDS
T09626
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
rsr
Roseivirga spongicola
Brite
KEGG Orthology (KO) [BR:
rsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsr03016
]
T7867_18655
Enzymes [BR:
rsr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
T7867_18655
Transfer RNA biogenesis [BR:
rsr03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
T7867_18655
Prokaryotic type
T7867_18655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
DUF936
Gmx_para_CXXCG
Motif
Other DBs
NCBI-ProteinID:
WPZ10288
LinkDB
All DBs
Position
4263724..4264641
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AA seq
305 aa
AA seq
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MSIRVKILGSNSATPAHRRHHTSQLVNVEGKYYMIDCGEATQLQLKRYKLRAQRINNIFI
SHLHGDHYLGLMGLLSSMHLMGRNKPLNLYGPRGLSEIITLQLKYSDTAFNYDVAFHEVD
TQKFQLIHEDELISVHSIPLDHRIPCCGFLFEEKPKNRRLIRETIPEDLSVRNIIRLKKG
EDIFDEEGKLLFKNEDMTLPPRQSFKYAYCSDTKYNESIIPIIEGSDMLYHESTFLEEHR
DRAHNTFHSTAKEAATIAEKAKVGKLLLGHFSARYKELEPIQEEARLVFPESHLAIEGEE
YILDS
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
ttgagcatcagagtaaaaatattaggctccaattcagccactcctgcacacaggagacat
cacacctctcaactagtaaatgtagaaggcaaatactacatgattgactgtggtgaggct
acccaattgcagctgaaacgctacaaacttagagctcaaagaattaacaatattttcatt
tctcacctccatggtgaccattacctaggtctgatggggcttctttcttccatgcactta
atgggcagaaacaagcctctcaacctgtatggcccaagaggtctttcagaaataattacg
ctacaacttaagtattcagatactgcttttaattatgatgtagcttttcatgaagttgac
acacaaaagtttcaattgattcatgaagacgagttaatttctgttcattccattcctcta
gaccatagaataccttgttgtggttttctatttgaagaaaagcctaagaatagacgccta
attagagaaactattccggaagacttatctgtaaggaatatcattaggctcaaaaaagga
gaagatatattcgatgaagaaggcaagctcctcttcaaaaatgaggacatgactcttccg
ccaaggcaatctttcaaatatgcctattgctccgacactaaatataacgagtctataatc
ccgattatagaaggctcagacatgctttaccacgaatcaacttttctggaagagcacaga
gatagagcacataacaccttccacagcacagccaaagaagctgcaaccattgctgaaaaa
gcaaaggttggtaaactgttactcggacatttttctgctaggtacaaagagctagaacct
attcaagaagaggcaaggcttgtgttcccagaatctcatttggctatagagggcgaagag
tatatcttagatagctag
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