Roseivirga spongicola: T7867_19190
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Entry
T7867_19190 CDS
T09626
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rsr
Roseivirga spongicola
Brite
KEGG Orthology (KO) [BR:
rsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsr03400
]
T7867_19190
Enzymes [BR:
rsr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
T7867_19190
DNA repair and recombination proteins [BR:
rsr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
T7867_19190
Prokaryotic type
T7867_19190
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WPZ10389
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Position
4377138..4378439
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AA seq
433 aa
AA seq
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MSKISIFWFRRDLRFIDNTGLYYALKETKDVLPVFIFDKNILDKLEDKADARVEFIQSTL
EAMNNDLASKGSGIKTFYSTPLEAYKQLIDEYEIEAVYTNRDYEPYAKDRDKQIESLLKE
NNIDFFTFKDQVIYEYEEIVSGSGSFYKVFTPYSKSWKEKYKANRPEIKSSALRFENWAK
LKNNQVHSLEDMGFEPTEVKIPSSNVEEEVLKHYDKKRDYPAQDATSRLGIHLRFGTISI
RQLAEKAISLNETFLNELIWRDFYAMILANNPKVVDNAFKKEYDQIPWRQDEEGFEKWCK
GKTGYPIVDAGMRQLNKTGYMHNRVRMVVASFLTKHLLIDWRWGEAYFAKKLLDFDLASN
NGGWQWAAGTGTDAQPYFRVFNPQSQTEKFDPDLKYIKKWVPEYGTDKYPDPIVEHKSAR
QRAIDTYKKALDK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaatttcaattttttggttccggagagaccttcgctttatagataatacaggg
ctttattatgcattaaaagagacgaaagatgtgcttcctgttttcatcttcgataaaaac
attctggataaattagaagacaaagccgatgcaagagtagagtttattcaatctacactt
gaagccatgaacaatgatttagcttcgaaaggcagtggaattaaaaccttctactctacc
ccactcgaggcatataaacagctcattgatgaatatgaaatcgaggctgtttacaccaat
cgtgactatgagccttacgctaaagacagagacaagcagattgaatctctattgaaagaa
aacaacatagacttcttcacttttaaagatcaggtgatctacgaatacgaagaaattgtt
tctggttcaggaagcttttataaggtattcaccccttacagtaaaagttggaaagagaaa
tacaaggccaacagacctgaaattaagtctagtgcattgcgcttcgaaaattgggcgaaa
cttaaaaacaaccaagtccactcgttagaagatatggggtttgagcctaccgaggtcaag
ataccatcatcgaatgtagaagaggaagtactcaaacattacgataaaaaaagagactac
cctgcacaagatgctacctctagactaggcatacatttaaggtttggaactattagcata
aggcaattggccgagaaagccatctccttgaatgagactttcctaaacgaactgatctgg
agagacttctacgccatgattctggccaataatccaaaggtagtagacaacgcctttaag
aaagagtatgatcaaataccatggagacaagatgaagaaggctttgagaaatggtgtaaa
ggcaaaactggctacccaattgtagatgccggaatgcgccagctaaataaaaccggttac
atgcacaaccgagtaaggatggttgtcgccagcttcctgaccaaacacttactgatagat
tggcgatggggtgaagcttacttcgccaaaaaactgctagacttcgatctagcctctaat
aacggtggctggcagtgggctgcaggaactggcaccgatgcacagccatacttccgagta
ttcaacccacaatcccaaaccgaaaaatttgatccagacctgaaatacatcaaaaaatgg
gttccagaatacggcacagataaatacccagacccgatagttgaacataaatcggccagg
caacgagcaattgacacttacaaaaaagctttggacaaatag
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