Rummeliibacillus stabekisii: ATY39_00325
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Entry
ATY39_00325 CDS
T04369
Name
(GenBank) hypothetical protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
rst
Rummeliibacillus stabekisii
Pathway
rst02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rst00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ATY39_00325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rst03000
]
ATY39_00325
Transcription factors [BR:
rst03000
]
Prokaryotic type
Helix-turn-helix
Other families
ATY39_00325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_2
HTH_3
HTH_19
TPR_8
TPR_10
HTH_31
TPR_1
DUF2780
ANAPC5
TPR_MalT
Motif
Other DBs
NCBI-ProteinID:
AMW97992
UniProt:
A0A143H8G6
LinkDB
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Position
72486..73742
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AA seq
418 aa
AA seq
DB search
MIGERIRYFRKLKNITQKDLADGICAISYLSKIENGVATASEEVINMLCGRLGLNSEEAV
NEFDGGLLRVLTQFKGNVKNRNFSEAEKLISELNDVIQESQSQEIRIQYDVYLFGLYVFT
GQVKQSTIQYQKIHQTSIDLLSQWPQIFFDYYYYLSLYLCRKEEFHKAMKCNEKLIGLMK
LIEISEIEKGRIYFNQAWLYTHHRLYFQSIQVARNAIESFEAEFDIENLLDSLILIGVNQ
RRIQDYYESEKYLKRALQLSEKLQKTHTIAITQHNLGYLYSDMGRSLEAIDQLQSAFQSA
QLSGNELLCLIYLLSKEYMKLEQFEEAMEWCDKGLSLLNTYPYREYHYHFHLQYMEIRNV
ENEQYEETLREAINFFEKEQLNQYVVEYAEKLANYYYQNTKYKKASELYRLANKARQN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
ttgatcggtgaacgaatccgctactttcgaaaactgaaaaacattacgcaaaaagatcta
gcagatggaatatgtgccatttcctatctttcaaaaatcgaaaatggggtagccacggcg
agtgaggaagtcatcaacatgttatgtggaaggctgggacttaactcagaggaagcagtg
aatgaatttgatgggggattactgagggttcttactcagtttaaagggaatgtaaaaaac
agaaacttttcagaagctgaaaagctcatttcagagttaaatgatgtaattcaagaaagt
caatcgcaagagattcgtatacagtacgatgtttacttatttggattatatgtttttaca
ggacaagtcaaacagtctaccattcagtatcaaaaaatccatcaaacatcgattgatctg
ctttcccagtggccacaaatattttttgattattattactacttaagtttgtatctgtgt
aggaaagaggaatttcataaagccatgaaatgcaatgaaaagctaataggcttaatgaag
cttattgaaatttcagagattgaaaaaggtagaatctactttaaccaagcttggttatac
acacatcatcgcttgtattttcaatccattcaggttgctagaaatgctatcgaatccttt
gaagcagaatttgatattgaaaatttacttgattcattaattttaataggtgttaatcaa
cgccgaattcaagattattatgaatctgaaaagtatttaaaaagagccttgcagctttct
gagaaattacaaaaaacgcatacaattgctatcacgcaacataatctaggttatctttat
tcagatatgggtcgttctctagaagctattgatcagctacagtctgccttccagtctgca
caactatcgggtaatgaattactatgtttaatttatttgctatcgaaagaatatatgaaa
ctggaacagtttgaagaagcaatggaatggtgtgataagggactgtctttattaaatact
tatccttatagagaatatcattatcactttcatctgcagtacatggagattagaaatgtg
gaaaatgagcagtatgaagaaacacttcgagaggcaatcaatttctttgaaaaagaacag
ttaaaccagtacgttgtggaatatgcagaaaagctagcaaactattactaccaaaatact
aagtacaaaaaagcgagcgagctttatcgtttagcaaacaaagctcgtcaaaattag
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