Rummeliibacillus stabekisii: ATY39_01405
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Entry
ATY39_01405 CDS
T04369
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rst
Rummeliibacillus stabekisii
Brite
KEGG Orthology (KO) [BR:
rst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rst03400
]
ATY39_01405
Enzymes [BR:
rst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ATY39_01405
DNA repair and recombination proteins [BR:
rst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ATY39_01405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
nSTAND1
ATPase_2
TsaE
Motif
Other DBs
NCBI-ProteinID:
AMW98190
UniProt:
A0A143H9X9
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All DBs
Position
331630..335139
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AA seq
1169 aa
AA seq
DB search
MSLRFITGRSGSGKTALIQQEIVAKVEEQPIGSPIFLIVPDQMSFSAERDMTHEYSIKGL
IRAQVTTFKRLAWRVLQETGGISRKEVNGFGYRMLIRKLLDQHKEEFALFKKAADKRGFT
AEMESLLKEFSRYSLDSTALTNLMTSFADVDAPKTLQDKMHDLHLLVGAIEESLGTTYVD
SEGYYPLLASQLGKSLAIQQADIYIDGFTAFTTRELEVVEELLKTARRVTIVLPMESVAD
AEDEYALFYQSSRTCAKLMEIAQENGVELEPTIHQREQHRFQTADLRHLESQFDAFPALQ
QESDGSAEIIEASNRRAEVHAIARKIHGLVHEDGMRYRDMAILYRQQDVYDPLIHTIFPQ
YDLPYFVSQKKPMLHHPLIELSRSALEAIQSGWQYEPIFRAVKTDLFFPMNAEKQIWRER
ADLLENFVLAKGIYGNRWFQDERWLYKKYRGLELYTANQTDEERAYQQEIELVREKIRVP
LKALETELQEAATGRDIATSIYRFMETLEVFDKLQTLKDYEIEKGRLLEASEHEQAWKNW
VDILDQFVLLFGDQPMNLEEAFEILDEGFDTLEFSRIPPSIDQITIASADIARLTHVKAV
FVIGVNDGVYPKRLDYEGILADSEREWFSRLGHEIAPTSKTRLLEEEFITYHAFTMQSHR
LFVSYALADEESKALLPSLYIKRLEDQLKNIRKTMALVDPTESTEAFDIMSYIVHPRTSL
AYLMKGLRMQQEHGELSPEWLALQQYYEKDPYWRTILERLMRPLKTHGQAEPLTPEMTEA
LYGSTLTSSVSRIEKFYRCPFSHFSMYGLNLEERAEYRLETPTIGDLFHAALKWISEETD
RLHLSWSQLTNEQCAHLAKKAVEEISPLLYHQILLSNARYRYIARKLTYIVQRTLQSLSQ
HARVSGFKPIAIEAAFGPNEPLPPLIIQLDNNKKMQMRGRIDRVDATTIDGKPYIRVVDY
KSSARKLDLNEVYYGLSLQMLTYLDVAITNSEEWLPVHAEAGGVLYIHVHNPMLSASNSL
SIEEAETERLKEFKMRGLLLNDSQSILAMDENLAESGGYSKVVPVYVKKDGSASPGMSSI
IAPDDMSSLTHFIRSKHKKAGQEILEGKTDISPFKMNQRTACEFCSFKSVCQFDTTDPAQ
HYRQLSLEKPEQVIEKIRKESGHDDLSHT
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgcgattcattacaggcagatctggatcgggcaaaacagccctgattcaacaa
gaaattgtggcgaaagtggaagagcagccaattggttcgccgattttcttaattgtgcct
gatcaaatgtcattttcagccgagagagatatgacacacgaatatagcattaaagggctt
attcgtgcacaagtcacaacctttaaacgactggcatggcgtgttctgcaagaaacaggt
gggattagccgcaaagaagtcaatggttttggctatcgaatgctgatccgaaaattgttg
gaccaacacaaagaagaatttgctctgtttaagaaagctgctgataaacggggatttaca
gctgaaatggagtcattgctaaaggaatttagcagatatagtttggatagtacagcgctg
acaaatctaatgactagttttgcagatgtagatgcgcctaaaacgctacaggataaaatg
catgacttacatttgctcgtaggggcgattgaagaatcattgggcacgacgtatgttgat
agtgaaggctactatccattattagcgtcacaactgggaaaatcacttgctatccaacag
gcagatatttatatagatggctttacggcatttactacacgagagttagaagtcgtagag
gaactgctaaaaacagcgcgccgcgtaacgattgtattaccgatggagtcagttgcagat
gcagaagatgagtatgcattgttctaccaatcttcgagaacgtgcgctaaattaatggaa
atagcgcaggaaaatggcgttgaattagaaccgactatccatcaaagggagcaacacaga
tttcagacggctgatttacgacatttagaaagtcagtttgatgcatttccagcacttcaa
caagagagcgatggcagtgcggagatcattgaagcatcaaatcgtcgggcagaagttcat
gctattgctcgaaaaattcatgggcttgtccatgaggatggtatgcgctatcgagatatg
gccattctttatcgtcaacaggatgtctatgatccactcattcacaccatctttcctcaa
tatgatctgccatactttgtcagccaaaagaagccgatgcttcatcatccgttgattgaa
ttaagtcgatcagctttggaagctatccaatccggctggcagtatgagcctattttccgt
gccgtcaaaaccgatttatttttcccgatgaatgcagaaaagcaaatatggagagaaaga
gcagacttacttgaaaattttgttttggcgaaggggatatacggcaatcgctggtttcaa
gatgagcgctggctctacaaaaaatatcgcggactagaattatatacagccaatcaaaca
gacgaagaacgggcctatcaacaagagatagaattggtgcgcgaaaaaattcgtgtgcca
ttgaaagcattagaaacagaattgcaagaagccgctacaggtagagatattgccacatcc
atttatcgtttcatggagacgctagaagtatttgataagctgcaaacgttaaaggactat
gaaattgaaaaaggacgtttactggaagcaagcgagcatgaacaagcatggaaaaattgg
gtggatatcctagaccagtttgttcttctttttggcgatcagcctatgaatttagaagaa
gcctttgagattttagatgaaggctttgatacattggagttctcaagaattcctccttct
atagaccaaataacaatagcatcagctgatatagctcgtttaacacatgttaaggcagtt
tttgtgattggcgtaaatgatggtgtgtatccaaaacggctcgattatgaagggatattg
gctgacagcgagcgtgagtggttttcaagacttgggcatgaaatcgcaccaacctctaaa
actcgcttattagaagaagaatttatcacctaccatgcatttactatgcaatcccatcgt
ttgtttgtttcttatgcgctggctgatgaagaaagcaaggcactgctaccgtctctgtat
atcaaacgcttggaagatcaactgaaaaacatacgtaaaacaatggcgcttgttgatccg
acggaatcgactgaggcttttgatattatgtcatatattgtgcatccgcgtacctcgctt
gcgtatttaatgaagggactacggatgcaacaggagcatggagagttaagtcctgaatgg
ttagcgcttcaacagtattatgagaaggatccttattggagaaccattttagagcgctta
atgcgtccattaaaaacgcatgggcaggctgaacctttaacacctgaaatgacagaggcc
ctttatggatctacattaacttccagtgtatcgcgaatagagaagttttatcgctgtcca
ttctcccatttttcaatgtatggattaaatctggaggaaagagcagagtatcgcttagaa
acacctacaatcggcgatctttttcatgctgctttgaaatggattagtgaagaaacggat
cgtctgcacctctcatggagccaattaacgaatgagcaatgtgcgcatttagcaaaaaaa
gctgttgaagaaatatcgccacttttatatcaccaaattttattaagcaatgcacgctac
cgttatattgctcgaaagttgacctatatcgtacaacgtacactgcaatcgcttagccag
catgcaagagtgtcgggctttaaacccattgcgattgaagcagcttttgggccgaatgag
cctttgccaccacttattattcagttggacaacaataagaaaatgcaaatgcgcggccga
attgaccgtgttgatgcaacaaccattgatggtaaaccgtatatacgcgttgtcgattat
aaatcatctgcccgcaagctggatttaaatgaagtttactacggattatctttacagatg
ctgacatacctagatgtggccattacgaattcagaggaatggcttccggtccatgccgaa
gctggcggcgttctttatattcatgttcacaacccaatgctaagcgcatctaatagctta
tcaatagaagaagccgaaactgagcgtttaaaggaatttaaaatgcgtggtctattatta
aatgattctcaatcaatccttgcgatggacgaaaatcttgctgagagtggaggatattcc
aaggtcgtgcctgtttatgtcaaaaaagacggcagtgcatctcccggtatgtcatccatc
atagcgccagatgatatgagttcacttacacactttattcggagtaagcataaaaaggca
ggccaggaaattctggaaggcaaaacggacataagcccattcaagatgaatcagcgtacc
gcatgcgagttctgttcatttaaaagtgtatgtcaatttgatacaacagacccagcgcag
cattatcgccaattatcgttggagaagccagaacaagtaattgaaaagatacgaaaggag
agtggtcacgatgacctcagccatacctaa
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