Rummeliibacillus stabekisii: ATY39_02370
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Entry
ATY39_02370 CDS
T04369
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rst
Rummeliibacillus stabekisii
Pathway
rst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ATY39_02370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rst03400
]
ATY39_02370
Enzymes [BR:
rst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ATY39_02370
DNA repair and recombination proteins [BR:
rst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ATY39_02370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
PIF1
AAA_16
Zn_ribbon_6
ATPase_2
TrwB_AAD_bind
Flavi_DEAD
AAA_30
ADDB_N
Zeta_toxin
UvrD-helicase
O_Spanin_T7
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AMW98373
UniProt:
A0A143H9F2
LinkDB
All DBs
Position
534526..536931
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AA seq
801 aa
AA seq
DB search
MAQVIVDVSAYPVDRPFDYKVPEELQELVEVGCRVKVPFGKRNVLGFITALQSESDVPKD
KLKSIAELLDIEPILTNEMLELAKWMTDHTLCYEIDALQVMLPSALRAKYEKTILLKVDP
TYLPEELQQLFGNKTAIPYKKVESANLLRVLKSCMKNGYVEQKTVVKQQGNVKEVRKVKI
SSNYERLQEISESIPPRAKKQRQVVEWMALHVGEEFTPNEICETVSVTPQVVNAVIEKGA
ATYFQEEVYRDPFSKEVKGSIPLALTDEQEVALKEILHSVKSPQATTYLLHGITGSGKTE
VYLQVIQEAINRGQEAIVLVPEISLTPQMTERFRARFGDLVAVMHSGLSKGEKYDEWRKI
GRGEVKVAVGARSAVFAPFTNLGLIILDEEHESTYKQEDTPRYHARDIAIWRSEYHHCPV
ILGSATPSLESFARAKKNVYTLLTLEKRAKQQSLPKVEVVDMREELHNGNRSMFSGALME
AIEDRLKKKEQMVLFLNRRGFSSFVLCRDCGTVVQCKNCDISMTYHRSSEKLKCHYCGYE
EHVPTECPECHSEHIRFFGTGTQKIEAEIYKLFPEARVLRMDVDTTRQKGAHEKILEDFG
NLKADILLGTQMIAKGLDFPKITLVGVLSADTSLNLPDFRAAERTFQLLTQVSGRAGRHD
LPGEVIVQTYSPEHYAVQLSKEQQYAPFYDQEMMMRHQFAYPPYYFVALIQVTHEDVLMA
AEYAGKAMDFLKLKLSSQVGLIGPTPASISRVQNRYRYQCLIKYKKEPNLTETLKQLIRI
YRTDWIKKGIQLTVDLDPSVI
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
attgcacaagtaatagtggatgtgtccgcatatcctgtcgaccggccttttgattacaaa
gtgcctgaagaattacaagagctagtcgaggttggctgccgtgtaaaagtaccatttggc
aaaagaaatgttctgggatttattacagctttacaaagtgaaagtgatgtaccaaaggac
aagcttaaatccattgccgaactgttagatatcgagcccattttaacaaatgaaatgcta
gagctggctaaatggatgacagaccatacgctgtgttatgaaattgatgcactgcaagtt
atgctcccatccgcattgcgtgcgaaatatgaaaaaacaatccttctaaaagtagatcct
acttatctgccagaggaactgcagcagctattcggaaataaaacggccattccttataaa
aaagtagaaagtgccaatctattaagagtgcttaaatcttgtatgaagaatgggtatgta
gagcaaaaaacagttgtcaaacaacaaggcaatgtgaaagaagtccgcaaagtcaaaata
tcaagcaattatgagagattgcaagagatctctgaaagtatccctccacgagctaaaaaa
cagcggcaagtcgtagaatggatggctttgcatgtgggagaggaatttactcctaatgaa
atatgtgaaacggtgagcgtgacgccacaggttgtaaatgcggttattgaaaaaggagcg
gccacatatttccaagaggaagtgtatcgtgatccattttcaaaagaagtgaagggttca
attcctctagccttaacagatgaacaagaagtagccttgaaagaaattttgcattctgta
aaatcacctcaagcaacaacctatttattgcatggcatcacaggaagcggcaagacggaa
gtatatctgcaagtgatccaggaagcgattaataggggacaagaagctattgtattggta
cctgaaatatccttgacaccacagatgacagaacgcttcagggctcgctttggcgatttg
gttgcagtaatgcacagcggattgtcaaagggtgaaaaatatgatgaatggcgaaaaatt
gggcgtggagaagttaaagtagcagttggagcaaggtcagctgttttcgcaccttttaca
aatttaggcctgattattctagatgaagaacatgaatcaacgtataaacaagaagacacg
cctcgttatcatgcaagagatatagcaatttggcgcagtgagtatcatcattgccccgtt
attttaggaagtgctaccccttcccttgaatcgtttgcacgtgcaaagaaaaatgtctat
acattattaacgctagaaaaaagagcgaaacagcaatctcttccgaaagtggaagtcgtt
gatatgcgagaagagctccataatggcaaccggtctatgttttcaggtgcattaatggaa
gcaatagaagatcgattgaagaaaaaagaacaaatggtattgtttctgaatcgtagaggt
ttttcttcttttgtgctatgtcgagattgtggaacagtcgtccaatgcaaaaattgcgat
atttccatgacatatcaccggtcttctgaaaagcttaagtgtcattactgtggttatgaa
gaacatgttccaacagaatgtccagaatgccatagcgaacatattcgattctttggcaca
ggtacacaaaagatagaagcagaaatttataaactatttcctgaagctcgtgttcttcga
atggatgtcgatacaacaaggcaaaagggcgcacatgagaagatattagaagacttcggg
aacttaaaagcagacattttgcttggtacgcaaatgattgctaaaggattggattttcca
aaaatcaccctcgtcggcgtattaagtgctgatacctcattgaatttaccggactttcga
gcggcagagcggacttttcaattgcttactcaagtaagcggacgagcaggacggcatgat
ttgcctggtgaagtcattgtccaaacatacagtccggaacattacgcagtccagctgtcg
aaagagcaacagtatgcgccattctatgaccaagaaatgatgatgcgtcatcaattcgct
tatcctccttattattttgtagcgcttatccaagttacacatgaagatgtactcatggca
gcagaatatgcaggaaaggcaatggattttttaaagctaaagctatccagtcaagtcggg
ctaattgggcctacacctgcctctataagccgcgtccaaaatcgatatcgttatcaatgt
ttgataaaatataaaaaagaaccaaacctaaccgaaacgttaaaacaactgataaggatt
tatcggacggactggatcaaaaaaggcatccagctaacagttgatttagatccttcagtt
atttaa
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