Rummeliibacillus stabekisii: ATY39_03165
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Entry
ATY39_03165 CDS
T04369
Symbol
polC
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
rst
Rummeliibacillus stabekisii
Pathway
rst03030
DNA replication
rst03430
Mismatch repair
rst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ATY39_03165 (polC)
03430 Mismatch repair
ATY39_03165 (polC)
03440 Homologous recombination
ATY39_03165 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rst03032
]
ATY39_03165 (polC)
03400 DNA repair and recombination proteins [BR:
rst03400
]
ATY39_03165 (polC)
Enzymes [BR:
rst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ATY39_03165 (polC)
DNA replication proteins [BR:
rst03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ATY39_03165 (polC)
DNA repair and recombination proteins [BR:
rst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ATY39_03165 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NI
DNA_pol3_a_NII
HHH_6
tRNA_anti-codon
DNA_pol_A_exo1
RNase_H_2
Rv2179c-like
HHH_3
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AMW98524
UniProt:
A0A143H9W9
LinkDB
All DBs
Position
673587..677921
Genome browser
AA seq
1444 aa
AA seq
DB search
MANEQDARQRFQLLLQQINMTEDVVMPFFESAELERLTVHKKDKVWRFSIKLPHILPFQL
LRDFQMRLKQAFSSIADIQITIEATNQQLTQDLISDYWLMIVEEIDEMSPPLREGLAKQV
PEWNGQKIMLNCQHEFQLMTLKSKYADVLSMTYKQYGFPHMAVDFQLVESTEDLAEQQRQ
FLEQRQQEEIAFAKKAVMDMQKREKERQHNPEGVDLSDRPFQLGVPIKHDEPIMDIHQIQ
DEERRVVIEGYVFDAEVKELRSGRSLLTLKMTDYTDSILVKMFSRDKEDAALMQCAKKGM
WLKVRGSVQNDTFVRDLIVMAQDMVEIKPVLKKDQAKEGEKRVELHLHTPMSQMDAVSSV
DALVGQAAKWGHEAIAITDHAIVQSFPDAYNAGKKHGIKIIYGLEANLVDDGVPIAYDEQ
HRLLEDDTYVVFDVETTGLSAAYDTIIELAAVKIRNGEVIDKFESFANPHHPLSTTTIEL
TGITDDMVRNAPEVVDMIKEFHAFIGDTIVVAHNASFDIGFLYEAYKKAGVDEFHHPVID
TLELARFLHPELKNHRLNTLCKKFGIELTQHHRAIYDTEATGYLLLHLLKEADAKGITYH
DDFNKYIGEGDSYKRARPTHCTLLAVDNDGLKNLFKLVSESHVNTFYRVPRIKRSSLQRL
RKGLLVGSACDKGEFFTAVMQKSMEEAMEVAKFYDYLEVHPKGVYSPLIEAELIRDEWNL
EDIIRKIVKIGKKLGKPVVVTGNVHYLTENDAIFRQVLVRSQGGANPLNRYKLPAVHFRT
TDEMLEDFAFLGADVAKEIVVTNSQKIANMIGEVVPVKDELYTPKIEGADQTVREMTYKM
AHQIYGETLPEIVEARLEKELGSIIGHGFAVIYLISHKLVKKSLIDGYLVGSRGSVGSSL
VAAMMEITEVNALPPHYICPNCKQSEFFNDGSVGSGFDLPNKDCPSCGTPYKKDGHDIPF
ETFLGFKGDKVPDIDLNFSGHYQPRAHNYTKILFGEDYAYRAGTIGTVAEKTAYGYVKGY
ASDNNLNFRGAEVDRLVQGCTGVKRTTGQHPGGIIVVPNYMDIFDFSPFQYPADAQDSEW
KTTHFDFHSIHDNVLKLDILGHDDPTVIRMLLDLTGIDPKSIPTDDPEVMKIFTGPESLG
ITPEQINCKTGTLGIPEFGTRFVRQMLEETKPSTFSELVQISGLSHGTDVWLGNASELIE
NGTCVLSEVIGCRDDIMVYLIYQGLEPSLAFKIMESVRKGKGLTEDMEAAMRKESVPEWY
IDSCKKIKYMFPKAHAAAYVLMAVRIAYFKVHFPIVYYCAYFSVRADDFDLIAMVNGSQM
IKSRIEEIESKGLDASPKEKNLLTVLELALEMCERGMAFQKVDLYKSKATEFVIEGQTLI
PPFNAIPGLGNNVAYAIVKAREDGEFLSKEDLQIRGRVSKTLIEYMDKLGCLEGMPDANQ
LSLF
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgaacaggatgcaagacaaagatttcaattgctcttgcaacaaatcaatatg
acggaagatgtggttatgccattttttgaatcagctgagctagaacgcttaactgtgcat
aaaaaagacaaagtttggcgtttttcaataaagcttccgcatatattgccgtttcaactg
ctacgcgatttccaaatgcgtttaaaacaagctttttcatctatcgcagatattcagata
acaattgaagcaacaaaccaacagttaacacaagatttaatttctgattattggttgatg
attgtagaagaaatagacgaaatgtctcccccgcttcgtgaaggtcttgcaaagcaggtc
ccagaatggaatggacagaagattatgctcaattgtcagcatgagtttcaattaatgaca
ttgaagtcaaaatatgcagatgtattatccatgacatataaacagtatgggtttcctcat
atggccgttgattttcagttagtagaatcaactgaggacttggcagaacagcaacgccag
ttcctagaacaacggcagcaagaagagatagcttttgcaaaaaaagctgttatggatatg
caaaaacgtgagaaagagcgtcagcataatcctgagggagtggatttatccgatagacca
ttccaactaggtgttcctattaagcacgatgaaccgattatggacattcatcagatacaa
gatgaagaacggcgtgtagtaatcgaaggatatgtatttgatgcggaggtcaaagaatta
agaagtggacgatcacttcttacattgaaaatgactgattacacagattctatcttagtc
aagatgttctctcgcgataaagaagatgcagccttgatgcaatgtgcaaaaaaaggaatg
tggctaaaagtacgcggctctgtgcaaaacgacacatttgtcagagatttaatcgtcatg
gcccaggatatggtagagattaaacccgttttgaagaaggaccaggcaaaagaaggcgaa
aaacgtgttgagcttcatctacatacgccaatgagccagatggatgcagtatcttcagta
gatgctcttgtcggtcaagctgcaaagtgggggcatgaagcgattgccattaccgatcat
gcaatcgtccaatctttcccggatgcctataatgctgggaaaaaacatgggataaagatt
atctatggattagaggcaaatttagtagatgatggcgtacctatagcatatgatgaacaa
catcgtctactagaagacgacacttatgttgtttttgacgtagaaacaactgggttatct
gcagcatatgacactatcattgagctggcagcagtaaaaatccgaaatggtgaagtaata
gacaagtttgaaagctttgcgaaccctcatcatccactatcaacaacaacaatagagtta
acaggtattacggatgatatggtcagaaatgctccagaagtggttgatatgattaaagag
ttccatgcttttatcggtgacaccatagtagtagcacataatgcatcttttgatataggc
tttctatatgaagcatataagaaagcgggcgttgatgagtttcatcaccctgtaatcgat
acattagagctggcccgtttcttgcatcctgagcttaagaaccaccgtttaaatacattg
tgtaaaaaattcggcattgaattaacacagcaccaccgcgctatttatgatacagaagca
acgggatacctattacttcatttattaaaagaagcagatgcaaaaggtatcacatatcat
gatgattttaataaatatatcggtgaaggagattcttacaaaagggcacgtccaacacat
tgtacactcctagctgttgataacgacggtttgaaaaatttatttaaacttgtcagcgaa
tcgcatgtcaatacattttatcgtgtaccacgaatcaagcggtcgtcgcttcaacggttg
cggaaaggtttactagtaggtagtgcctgcgataagggtgagttttttacagctgtcatg
caaaagtctatggaagaagcgatggaagtagcgaagttttatgactatttagaagtccat
ccaaaaggagtatattctccgcttatcgaagcagagctaatacgagatgaatggaattta
gaagatattatacgaaaaatcgttaaaatcggtaaaaaattaggcaaacctgtagttgta
acaggaaacgttcattatttgactgaaaatgatgcgattttccggcaagtgctcgttcgt
tctcaaggtggagctaacccactaaatcgctacaaattgccagcagttcattttagaact
acagatgaaatgctagaagactttgcttttttgggagcagatgtggcaaaagagattgtc
gtaaccaactcccaaaaaatcgccaatatgattggtgaagttgtgccagttaaagatgag
ctatacacaccaaaaattgaaggtgctgaccagacagtacgtgaaatgacgtataaaatg
gctcatcaaatatatggtgaaactctaccggaaatagttgaagccagattagaaaaagaa
ttaggttctatcattggccatggctttgcggttatctatttaatctcacataagctggta
aaaaaatcattgattgatggctatttagtgggctcccggggctccgtaggctcttcgctt
gtagcggctatgatggagattacagaagtaaatgctttgcctccacactatatttgcccg
aactgcaagcaatcagaattctttaacgatggctctgttggctcaggatttgacttgccg
aacaaagattgcccgtcatgcggaactccctataaaaaggatggacacgacatacctttc
gaaacattccttgggtttaaaggggataaggtgcctgatattgacttgaactttagtggg
cattatcaaccacgggcacataactatactaaaatattgtttggagaagattatgcatat
cgtgccggaactattggtacagttgccgagaaaacggcttatggctatgtaaaaggctac
gcatcagacaacaatttgaattttagaggtgcagaagtggatcggcttgtccaaggatgc
acaggcgtcaaaagaacaaccggtcaacacccaggcggcattatagtcgtacctaactat
atggatatctttgatttttcaccattccaatatcctgctgatgcgcaagattctgaatgg
aaaacaactcattttgatttccactctattcatgataatgtactgaagctggatattttg
ggacacgatgatccgactgttatccgtatgctacttgatttaacaggaattgatccaaaa
tctattccgacagatgatcctgaagtaatgaaaatatttacaggtccagaatcgttaggc
attacgcccgagcaaattaactgtaaaaccggtacattgggcattccagagtttggtacg
cgatttgtacggcaaatgttagaagaaacgaaaccgtctacgttctctgagcttgttcaa
atttccgggttatcacacgggacagatgtatggctcgggaatgcaagtgagctaatagaa
aatggtacttgtgtgttatcggaagtaatcggctgccgagatgacatcatggtgtattta
atttaccaaggactagaaccatcgttagcatttaaaattatggagagtgtgcgtaaaggg
aaagggctaacagaagacatggaagcagcaatgcggaaagaaagtgtgccggagtggtac
attgattcatgtaaaaagataaaatatatgttccctaaagcgcatgctgccgcatatgta
ttaatggctgttagaattgcctattttaaagttcatttcccgattgtatactattgtgca
tatttctcagttcgtgcagacgatttcgatttaatcgctatggtcaatggttcacaaatg
ataaaatcacgcattgaagaaatcgaaagcaaaggtttggatgcttctccaaaagagaaa
aacttgttgactgttttagaactagcgcttgaaatgtgcgaaagaggtatggcgttccag
aaggtagatttatacaaatcaaaggcaacggagtttgttatagaaggccagacgttaatt
ccgccatttaatgctattccaggcttagggaataacgtggcatatgctattgtcaaggca
agagaagatggtgaatttctttcaaaagaagatttacaaattcgaggtcgtgtttccaag
acattgattgagtatatggataaattgggctgcttagaaggaatgccagatgccaaccag
ctgtcactcttctag
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