Rummeliibacillus stabekisii: ATY39_03220
Help
Entry
ATY39_03220 CDS
T04369
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rst
Rummeliibacillus stabekisii
Pathway
rst03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ATY39_03220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rst03019
]
ATY39_03220
03016 Transfer RNA biogenesis [BR:
rst03016
]
ATY39_03220
Enzymes [BR:
rst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ATY39_03220
Messenger RNA biogenesis [BR:
rst03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ATY39_03220
Transfer RNA biogenesis [BR:
rst03016
]
Prokaryotic type
tRNA degradation factors
ATY39_03220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AMW98535
UniProt:
A0A143HAM2
LinkDB
All DBs
Position
686269..688380
Genome browser
AA seq
703 aa
AA seq
DB search
MNEKKVFTYEWAGRPLQIEVGQLAKQANGAVMVRYGETAVLCNATMSKHPKQTDFFPLTV
NYEEKLYAVGKIPGGFIKREGRPSERAVLTSRLIDRPIRPLFPDGFRNEVQVTSMVMSAD
PNCSSEMAAMVGSSLALMVSDIPFDGPIAGVQVGMINDEFIVNPTVEQLDQSLINLTVAG
TKDAINMVEAGALEVPEETMLEAIMFGHEEIKKLIAFQEEVTKESGKEKIEVTLHELDPQ
LTESITSQFETQMNAAIQTHEKHARDEAIEAVKAEVIAQFEEQEADDATLKQVGQILDKM
VKEEVRRLITEEKIRPDGRKLDEIRPLSSETGLLARAHGSGLFTRGQTQALSICTLGALS
DVQIIDGLGVEESKRFMHHYNFPQFSVGETGPMRGPGRREIGHGALGERALSAIIPDEKD
FPYTIRCVSEVLESNGSTSQASICASCLALMDAGVPIKAPVAGIAMGLIKKGDYYSILTD
IQGMEDHLGDMDFKVAGTAKGVTALQMDIKIDGLSREILEEALVQAKRGRMIILESMLAT
IAQPKEHLSAYAPKIQQIHINPDKIRDVIGPGGKQINKIIEETGVKIDTEQDGTISIASS
DEDMIKRAKEIIENIVREAKVGEYYMGKVKRIEKFGAFLEIFPGKDGLLHISEIQEERTK
AVEDVLKLGDELLVKVIEIDRQGRVNLSRKIVIKEEKERAEQQ
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaaaaaagtttttacctatgaatgggcaggacgaccattgcaaatcgaagtc
ggccagcttgcaaaacaagcaaacggtgcagtaatggtacgttacggcgaaacagctgta
ctatgtaatgctactatgtctaaacacccaaaacaaacagatttcttccctttaactgtg
aactatgaagaaaaactttatgcagtcggtaagattcctggaggttttattaaaagagaa
ggccgtccatctgaacgtgctgttttaacatctcgtttaattgaccgtccaatccgtcca
ttattcccagacggtttccgtaatgaagtacaagttacctcaatggttatgtcagcagat
ccaaactgcagcagcgaaatggcagctatggttggttcatcattggctcttatggtatct
gatattccattcgacggaccaatcgcaggtgtacaagttggtatgattaatgatgaattt
atcgttaatcctactgttgaacaattagatcaatcattgattaatcttactgtagctggc
accaaagatgcgatcaacatggtggaagctggtgcactagaagtaccagaagaaacaatg
cttgaagcaatcatgttcggacatgaagaaatcaaaaagcttattgccttccaagaagaa
gtaacgaaggaatcaggtaaagaaaaaattgaagtaacattgcatgagttagatccacaa
ttgactgaaagcattacttctcaatttgaaactcaaatgaacgcagcgattcaaacgcat
gaaaaacatgcgcgtgatgaagcgattgaagcagtaaaagctgaggtaatcgcacaattt
gaagaacaagaagcagacgatgctacattgaaacaagttggtcaaattttggataagatg
gtcaaagaagaagtccgtcgattgattaccgaagaaaaaatccgcccagatggccgtaaa
ttagacgaaatccgtccattatcttcagagactggattgttggcgcgtgctcatggttca
ggattgtttacacgtggacaaacacaagcgctatcaatctgtacgcttggcgcattaagc
gatgttcaaattattgatggtcttggtgtagaagagtcaaaacgctttatgcaccattat
aatttccctcaattctcagttggggaaacaggaccaatgcgtggtccaggacgccgtgaa
atcggtcatggagcacttggagaacgtgcattatccgcgattattccagacgaaaaagat
ttcccttacactattcgctgtgtatcagaagtattggaatcaaatggttcaacatcacaa
gcaagtatctgtgcatcttgcctagcattgatggatgcaggtgttccaattaaagcacca
gtagcaggtattgcgatgggtcttattaaaaagggcgattattattccatcttaacggac
attcaaggtatggaagaccaccttggcgatatggactttaaggtagctggaacagcaaaa
ggtgtaacagcacttcagatggacattaaaattgatggtttatctcgtgaaattctagaa
gaagcattagtgcaagcaaaacgcggccgtatgattattttagaatctatgttggctaca
atcgctcaaccgaaagaacacttatctgcatatgcacctaagattcagcagattcatatc
aaccctgataaaatccgcgatgtaattgggccagggggcaaacaaatcaacaagattatt
gaagaaacaggcgtaaaaatcgatacagagcaagatggtacgatttcaattgcttcttca
gatgaagatatgattaaacgcgctaaagaaataatcgaaaacattgtgcgtgaagcaaaa
gtcggcgaatactatatgggtaaagttaaacgtatcgaaaaattcggcgcgttcctagaa
atcttccctggtaaagatggcttgcttcatatttctgaaattcaagaagaacgcacaaaa
gctgtcgaagatgtcttgaaattaggtgatgagctattggtgaaagtcattgaaatcgat
cgccaaggccgtgtcaacttatcacgcaagattgttattaaagaagaaaaagaacgagca
gaacaacaataa
DBGET
integrated database retrieval system
