KEGG   Rummeliibacillus stabekisii: ATY39_03255
Entry
ATY39_03255       CDS       T04369                                 
Name
(GenBank) Zn-dependent hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
rst  Rummeliibacillus stabekisii
Pathway
rst03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rst00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ATY39_03255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rst03019]
    ATY39_03255
Messenger RNA biogenesis [BR:rst03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ATY39_03255
SSDB
Motif
Pfam: RNase_J_C RNase_J_b_CASP RMMBL Lactamase_B Lactamase_B_2
Other DBs
NCBI-ProteinID: AMW98542
UniProt: A0A143HA00
LinkDB
Position
693687..695360
AA seq 557 aa
MAKTITKNEVIRVIPLGGVCEVGKAMYVIEIDEEIFVVDSGLMFPEDEMLGIDYVIPDIS
YLVENKSRVKGIFLTHGHEDAIGSVAYLLQKVNAPVYGSKLTIALAKEHLKELPAPYQIK
FFEVTSKSRMNFQTTYVTFFHTTHSIPDSLGIAFHTSEGAIVHTGEFKFDQSAKGKYKPD
LAKMANLGEEGVFILMSDSTEAERPGYTIPENVVQEKLAKTFHNAEGRILVALYASNFIR
IQQVFDQATDADRKIAVIGKSLEHAFEVGMRLGYLSVDPDRIIPANKMNDYADEEIVAII
TGNQGEPLEGLEKIIRKHHRDIRIKNTDTVLITFTPSPGMEVQIADTMNSLAKAGAKVLS
ADKKVHVSGHGSQEDLKLMLNLMRPKYFIPIQGDYRMLIAHSKLAQQTGMSKAQIFIADK
GDIVEYKGGKMRMSGRVTAGNVLIDGIGVGDVGNIVLRDRKLLSQDGIFIVVVTINRKEK
KVASGPEILSRGFVYVRESEELLSESSELVRAVVESYVNKGSYEWTSIKQEIRDTLNSYL
FQKTKRRPMIIPIIMEY
NT seq 1674 nt   +upstreamnt  +downstreamnt
gtggcaaaaacaataacaaaaaatgaagtaatacgcgtcatccctttgggcggcgtgtgt
gaagtcggcaaagcaatgtacgttatcgaaattgatgaagaaatctttgtcgtggatagc
ggccttatgtttccggaagacgaaatgttaggcattgattatgtcataccagacatatct
tacttagtcgaaaataaatcacgtgtaaaaggtattttcttaacacatggacatgaagat
gccattggatctgtcgcatatttactacaaaaagtgaacgcgccggtttatggatctaaa
ttgacgatcgcattagcgaaagaacatttgaaagaattgcctgcaccatatcaaattaag
ttttttgaagtaacgagcaagagtcgcatgaacttccaaacgacttatgtgacattcttc
catactacacacagtatcccagattcattgggtattgctttccatacaagtgaaggtgct
attgtccatacaggcgaatttaagtttgaccaatcagcaaaaggtaaatataagccagat
cttgcaaaaatggcaaacttgggtgaagaaggcgtctttatcttgatgtctgattctact
gaagcagaacgtcctggctatacaattcccgaaaatgttgtacaggagaaattagcaaaa
acttttcataatgcagaaggccgcattttagttgcgctatatgcttctaattttatccgt
atccagcaagtatttgatcaagcaactgatgctgatcgaaaaatcgctgttataggtaaa
agcttagagcatgcatttgaagttggtatgcgtctgggttacttatctgttgatcctgac
agaattatcccagcaaataaaatgaatgattatgcagatgaagaaattgtggcgattata
acaggaaatcaaggtgaaccactagaaggattagaaaaaattatccgcaaacaccaccgc
gatatccgtattaaaaatacagacacagttcttattactttcacaccttcaccagggatg
gaagtccaaatcgcagacacaatgaacagccttgcaaaagcaggagcaaaagtattgtct
gctgataaaaaagtgcatgtttcagggcacggctcgcaagaagatttgaaattaatgctg
aatttaatgcgaccaaaatactttatcccaattcaaggcgactaccgtatgttaatagct
cactcaaagttggcgcaacaaacaggtatgtctaaagcccaaatttttattgctgataaa
ggagatatcgtagaatataaaggcggcaaaatgcgtatgagtggccgtgtcactgctgga
aacgtgctaattgacggtataggcgtaggcgatgtaggcaatattgtattacgcgatcgt
aaattgcttagtcaagatggtatattcattgtagttgtgaccatcaaccgcaaagagaaa
aaagttgcttctggtccagaaattttatcaagaggctttgtatatgtaagagaatcagaa
gaattattaagtgagtcttctgaattagttcgcgctgttgtcgaaagttatgtgaataaa
ggctcgtacgaatggacaagtataaaacaagaaatccgtgacacgctaaactcttattta
ttccaaaaaaccaaaagaagaccaatgattatccctattattatggaatattag

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