Rummeliibacillus stabekisii: ATY39_04535
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Entry
ATY39_04535 CDS
T04369
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
rst
Rummeliibacillus stabekisii
Brite
KEGG Orthology (KO) [BR:
rst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rst03019
]
ATY39_04535
03009 Ribosome biogenesis [BR:
rst03009
]
ATY39_04535
Enzymes [BR:
rst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ATY39_04535
Messenger RNA biogenesis [BR:
rst03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ATY39_04535
Ribosome biogenesis [BR:
rst03009
]
Prokaryotic type
rRNA helicases
ATY39_04535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
Flavi_DEAD
AAA_19
CMS1
DUF7117
PFK
SPOC_AIPP2
Motif
Other DBs
NCBI-ProteinID:
AMW98777
UniProt:
A0A143HAM5
LinkDB
All DBs
Position
946651..947949
Genome browser
AA seq
432 aa
AA seq
DB search
MSKYSDYNFQPFLREAIKELGFTEPTPIQKEMIPLILKGKSAIGQAHTGTGKTHSFLIPI
VERIKQDEQKVQAVITAPTRELATQIHAELMKIIEKTDIHAKLFIGGTDKQRSIDKLKSQ
PQIVVGTPGRIRDLVKEQALLVHTASILVVDEADLAFDMGFIEDIDQFATQMPENLEMYV
FSATVPESLHPFLRKYMEAPVHIHMNDKKPVAENIDFYLIPTRSKSRNTKLLEVMDAINP
YLAIIFTNTRKQAEAVANFLSSNGKRVGRIHGDLTPRDRKKMMKQIRDLEFQYIVATDLA
ARGIDIPGVSHVINYELPQDLEFFIHRVGRTARAGNKGLAITLFEPSDEDAIVRVEKMGI
PFVPKDIKNGEIIEMKERHARQNREKKVDEIDQIAKSRVRKPKKVKPGYKRNMRWEMDKI
KKKERRKRNRNR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagtatagtgattacaattttcaaccatttttgcgagaggctatcaaagaactc
ggttttactgagccaacgccaatccaaaaagaaatgattccgctgattttaaaaggaaaa
agcgcaatcggacaagctcacacaggaactggcaaaacgcatagttttttaattcctatt
gtagagcgtattaagcaagacgagcaaaaggtacaagcagttattactgcaccaactaga
gagcttgctactcaaatacatgcagagttaatgaagataatcgaaaaaactgatatccac
gctaaattatttataggtggtacggataaacagcgttcaatcgataaattaaaatctcag
cctcaaattgtagtagggacacctgggcgtatacgcgacctcgtgaaagaacaagcgttg
cttgtgcatactgcatctattttagttgtagatgaagcagacctagcatttgatatgggc
tttattgaggatattgaccagtttgcgacccaaatgcctgaaaaccttgaaatgtatgtt
ttctccgcaacagtgccagagagtttacaccctttcttaagaaaatatatggaagcacct
gttcatattcacatgaacgacaaaaaaccagtagcagaaaatattgatttttacttaatt
ccaacaagaagcaaatcacgcaatacaaaactcttagaggttatggatgctattaatcct
tatttagcgattatttttaccaatactcgtaaacaagctgaagcagtagcgaatttcctt
tcgagcaatgggaaacgtgttggacggattcacggtgatttgacgccgcgcgatcgtaaa
aaaatgatgaagcaaattcgggatttagaattccaatatatcgttgctactgacttagct
gctcgtggtattgatatcccaggtgttagccatgtaataaactacgaattaccgcaggat
ttagaattctttatacaccgtgttggccgaactgcacgtgcaggcaacaaaggacttgcc
attacattatttgagccttcagatgaagatgcgattgtacgagtagaaaaaatggggatt
ccttttgtgcctaaagatattaaaaatggcgaaattattgaaatgaaagagcgtcatgca
cgtcaaaatcgtgaaaagaaagtggatgagatcgaccaaattgcaaaatctcgtgtccgc
aagcctaaaaaggtcaaaccaggatataaacgtaatatgcgttgggaaatggataaaatc
aagaaaaaagaacgacgtaaacgtaaccgcaatcgttag
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