Rummeliibacillus stabekisii: ATY39_05400
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Entry
ATY39_05400 CDS
T04369
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
rst
Rummeliibacillus stabekisii
Brite
KEGG Orthology (KO) [BR:
rst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rst03400
]
ATY39_05400
DNA repair and recombination proteins [BR:
rst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ATY39_05400
Archaeal homologous recombinant proteins
ATY39_05400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
Nuf2_DHR10-like
SMC_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AMW98940
UniProt:
A0A143HBZ4
LinkDB
All DBs
Position
1117565..1120642
Genome browser
AA seq
1025 aa
AA seq
DB search
MKPLQLKLTAFGPYKQTEIIDFRELGEHRLFVIAGMTGAGKTTIFDGICFALYGSASGED
RAEIREIRSHFAAEDIHTSAELLFTIKGSTYRIFRQLAHKKKGNKNATGDKLEFVKVESD
GEKPVVESQKLTEINRKMEELIGLSKDQFKQIVMLPQGEFRKLLTSETENKEAILRKIFK
TESYRHLADSLKIKRDLAMNSLEKAHAKRDLYIKQIQSVIPERNSHLNEVLSAEHINIYQ
LLFALAEEVQYYQEQQAEKEALTQELNLKINLHHTLLVETKEFNKRLISYQEKEAELKRL
EEQKEHFEQIKQRIENAKKASHIIPIEERYYEKLQDKKQKEQELAKLEEEYRLTAMEHQK
QEVEFNEAKQNMPMIEQLTIELSTLQKLEVKLNELEKVSEKLSKRQLDVENFANRLKLIT
ADLEMIDNQRNQHATQITALLKPLETYDEKVVTLTELKEKQSTWQKWQRQMLSLEQLLID
EKTKKQMYESKLENYEREEKKWINNQASVLATKLVDGEPCPVCGSLEHQSLEGNHDISLT
EQQLSALRYEADTASTTYFEYQASVNAGRQQSLQWEEELRRLGMAPTDGEKISQEFQLLE
QEVNDLKRQKKKLEVLRQEKQLLDDKRETLQQKYATLEQEKNANLEGFYQVRGEFESLQK
EIPAGLSSIQALTAKIKELSLKKNELVRHYEVIEKKIEQSKNKVVSLRATIDSAKKNYIL
AKQALEEAQSQFKEAVYSAGFDQGSAYQAARIKLSDIETMESSYEAYKLHLYALKEQIKV
GLEEYAGQQTKDETNLERQLAAIQLEAKNLNEQIHAIKKYQADGHRLVKVIEESGKEIQQ
LEEKTAKIIDLYNVLRGQNSLKISFERFLQIEYLEQIIHAANTRLHPMSGGQYRLVRSDR
QEARGKQSGLGLDVYDAYTGQKRDVKTLSGGEKFNASLSLALGMSDVIQSFQGNIQIDTM
FIDEGFGTLDEEALNKAIRTLIDLQNNGRIVGIISHVAELKDAMPALLEVKKSKEGHSHT
KFVLK
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgaagccattacagctgaaattaaccgcatttggtccatacaaacaaacggaaatcatt
gattttagggagcttggggaacatagactcttcgttattgcaggaatgactggggctggg
aagacaacaatttttgatggaatctgttttgccttatatggttctgctagtggggaagac
agagcagaaataagggaaatacgtagccattttgcagcagaagatattcatacatcggct
gaacttttatttacaattaagggcagtacttaccgtatttttcgtcaattagctcacaag
aaaaaaggaaataaaaatgctacgggcgataaattggaatttgttaaagtggaatctgat
ggcgaaaagccagtagttgaatcacaaaaactcacagaaataaatcgtaaaatggaagaa
ctgataggtttatcgaaggatcaatttaaacaaatagttatgttgccacaaggagaattc
cgtaagttgctaacgtcagaaacggagaataaagaagctattctgcggaaaatttttaaa
acggaatcctatcgtcatttagcggatagtttaaaaatcaaaagagacttagcaatgaat
tctttagaaaaagcgcacgcaaagagagacttatatattaaacaaattcaatccgtaata
cctgaacgtaattcacatctcaacgaagtgttaagtgcagaacatattaatatttatcag
ttgctatttgcgttagctgaagaggtacaatattaccaagagcagcaggctgaaaaagaa
gctctaacccaagagcttaacttgaaaatcaacttacatcatacccttcttgttgaaaca
aaagagtttaacaaacgtctaatatcctatcaagaaaaagaagcagagctgaaacggtta
gaagaacaaaaagagcattttgaacaaataaagcaaagaattgaaaatgctaaaaaagcc
agccatattattccgatagaagaaaggtactatgaaaaattacaagataagaagcagaaa
gaacaagaattagccaagttggaagaagaatatcgacttacagcaatggagcatcaaaag
caagaagtggaattcaacgaagcaaaacagaatatgccaatgatagagcagcttactatt
gagctttcaacattgcaaaagcttgaggtgaagctcaatgaacttgagaaggtttctgaa
aaattatcgaaaaggcaactagatgttgaaaactttgctaatcgattaaagttgattaca
gctgacttagagatgattgataatcaacgaaatcagcatgcaacacaaattactgcactt
cttaaaccattagaaacctatgatgaaaaggtcgtcactctaacagaattaaaagaaaaa
caatcaacttggcaaaagtggcagagacaaatgttatctttagaacagttgctcatagat
gaaaaaaccaaaaagcaaatgtatgaatcaaaacttgaaaactatgagcgtgaagagaag
aaatggatcaataaccaagcaagtgtccttgccacgaagcttgtggatggtgaaccatgt
cctgtttgcggaagcttggaacatcaatcgctagaaggcaatcatgatatttcgctaaca
gagcagcaattatctgcgttgagatacgaggcggatacagcttctacaacttactttgaa
taccaagccagtgtaaatgccggtagacaacaaagtcttcagtgggaagaagagctacgt
agattgggtatggcaccgacagatggtgaaaaaatctcccaagagtttcaactattagag
caagaagttaacgatttaaagcgacaaaagaagaagttagaagtacttcgacaagagaag
cagctacttgatgataagagggaaacgttacaacaaaaatacgcaacccttgaacaagag
aaaaatgctaatcttgagggcttttatcaagtacgaggagaattcgaaagcttacaaaag
gagataccagctggcctttcctctatacaagcattgaccgcaaaaattaaagagctatct
cttaaaaaaaatgagttagttaggcattatgaagtaatagaaaagaaaatagaacaatcg
aagaataaggtcgtctctcttagagcaacaatcgatagtgctaagaaaaattatatcttg
gctaaacaagccttagaagaggcacaaagtcagtttaaagaagcagtctattctgcgggt
tttgatcaaggaagtgcctatcaagcagcaaggataaaactttcagacattgaaacaatg
gaatcttcctatgaagcatataaattgcatttatacgcattgaaggagcaaattaaagta
ggcttggaagaatatgcaggccaacaaacaaaagatgaaactaatttagagcgtcagctt
gcagctattcaattggaagcaaagaatttaaatgaacaaatccacgctattaaaaagtat
caagcagatgggcaccggttggtaaaagtaatagaagaaagcggtaaagagattcaacag
ctagaagaaaaaaccgcgaaaattatagatttgtataatgtcttacgtggtcagaattca
ctgaagatttcttttgaacgctttttgcaaattgaatatttagagcaaatcatccatgca
gccaatacgagattgcatccaatgtcagggggacaatatcgacttgttagaagtgaccga
caagaagcaaggggaaaacagagtggtttaggcttagatgtctatgatgcgtatactgga
caaaaacgagatgtaaaaactctatcaggtggcgaaaagttcaacgcatccttatcatta
gctcttggtatgtccgacgttattcaatcattccaaggtaatattcaaattgacacgatg
tttattgatgaaggatttggcactttagatgaagaagcattaaacaaagcaattcgaaca
ctgattgacctgcagaataatggtaggattgttggtattatttcacatgtggccgaatta
aaagacgcaatgcccgctctattagaagtgaagaaaagcaaggaagggcatagtcataca
aaattcgttttaaaatag
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