Rummeliibacillus stabekisii: ATY39_09105
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Entry
ATY39_09105 CDS
T04369
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rst
Rummeliibacillus stabekisii
Pathway
rst03030
DNA replication
rst03430
Mismatch repair
rst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ATY39_09105
03430 Mismatch repair
ATY39_09105
03440 Homologous recombination
ATY39_09105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rst03032
]
ATY39_09105
03400 DNA repair and recombination proteins [BR:
rst03400
]
ATY39_09105
Enzymes [BR:
rst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ATY39_09105
DNA replication proteins [BR:
rst03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ATY39_09105
DNA repair and recombination proteins [BR:
rst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ATY39_09105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AMW99603
UniProt:
A0A143HD05
LinkDB
All DBs
Position
complement(1844066..1847152)
Genome browser
AA seq
1028 aa
AA seq
DB search
MQPVYSQIVTAADMLKSTIRIDELLAFLKREGAKAAAITDSKLYGLLPFWRAFKQSSIHP
VIGLTVQVEFSAGICRPLVLYAQNNEGYHHLLKISSSTSLRENEALPLRWLHGYRTGCIA
LLPINDENWQQEKVFEDIEQIAEIFDAEHFAIGIDRPGGIKSPREDQIVHYCTERAITIC
ATHLSTFLQEDQADAFQVARAIASGTKMADQEKLTLRERHQYIPASVNWKEWFHDKEEWL
KAAETLLLSCQVELDYKKSYMPKFPTPDGVNATDLLKDKCLTGLRERVPNANENYHSRLQ
YELSIITKMGFADYFLIVADYIEYARSKNILTGPGRGSSASSLVAYTMRITDVDPLQYGL
LFERFLNPERITLPDIDVDFADYRREEVIHYVAEKYGANYTSQIITFGTLSAKAVARDVA
RVFGFNTEELSYISSLLPNRTGMSLQEAWQQSDVLRNHVNSSDLHKKWFQIALQLEGLPR
NASTHAAGVVLSPEPLVNIVPIEKGNEGLYLTQWPMGDVESVGLLKMDFLGLRNLTILER
IRSMILYNEERFLQFEKIPLHDSKTFELLKNGDTNGIFQLESEGMKQALKEIKPTSFNDI
VAVNALYRPGPMEFIPVYSKRKHGLEKVEMLHPVLEPILGETYGVIVYQEQILQIASRMA
GFSMGEADLLRRAVSKKKKELLDLEQEHFVTSSIEQGFDRKVAEEVYQLIVKFANYGFPK
SHAVAYSMISYQMAYLKAHFPAYFYAAMLTSAMGNQERFNKILQEAKQKGIAILSPSINR
SGRSFYVQNGSIRYALSAIKGVPHPFLNKLIELRRNGHGNWQDIFDLALDLTAVHFNRKT
VEPLIKAGALDEFGKDRAVLLATIDAAVKHAELYRPDQETTLLDDDSFFFGKPKHANASP
IPEKLKLQYEKEVLGTYISMHPIQKVKQAQHLVTPAFDNLKGLTGRHFVKVVGLVTEIKQ
IRTKKGELMAFVQLEDETGILSLTVFPKEYLHAIEWLKEEQIIMAEGNLEQRKGQVQVIY
KKGTVLSS
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctgtctattcacaaatcgttacagcggctgatatgctcaaaagtaccatacgc
attgatgaactccttgcatttttaaaaagggaaggggccaaggcagcagcgattactgat
tctaaattatatggtctattgcctttttggcgagcattcaagcaaagttcaatacaccct
gtcattggcttaacggtacaagttgagttctccgctggtatatgcaggccgcttgtactg
tatgcccaaaataacgaaggatatcatcacctattgaaaatcagttcgtcgacatcattg
cgagaaaacgaagcattgccgctgcgatggctgcatgggtatcggacaggttgcattgct
ttgcttcctattaatgatgagaattggcaacaggaaaaggtatttgaggatatcgagcaa
attgcggaaatctttgatgcagagcactttgctattggcatagaccgaccaggtggaatt
aaatcgcctagggaagaccaaatagttcactattgtacagaacgtgctattacgatttgc
gccactcatttgagcacttttctacaagaagatcaagctgatgcatttcaagtggccagg
gcgatcgcatcaggaaccaaaatggcagatcaggaaaaactgacattacgagaaagacac
caatatatacctgcttcagttaattggaaagagtggttccatgacaaagaagagtggtta
aaggcagcagaaactttgcttctttcttgtcaggtagaactagattacaagaaaagctat
atgcccaaatttcctacacccgatggagtaaatgcaaccgatcttttgaaggataaatgt
ctaactggattacgcgaaagagttccgaatgcaaacgaaaattatcatagccgcctacaa
tatgaattaagtattatcaccaaaatggggtttgcagattactttttgattgtagctgat
tatattgaatacgcaaggagcaaaaatatattgacaggacccggccggggatcttcagcc
agttcattagtggcgtatacaatgcgtattacagatgtcgacccattgcaatatggcttg
ctttttgaacgatttctaaacccagaacgtattacacttcctgatatagatgtcgacttc
gccgattatcgtagagaagaagttattcattatgtagcagagaagtacggggcaaactat
acatcgcaaattattacgtttggtacattatctgcgaaggcagtcgcaagggatgtagcg
agagtattcggctttaatactgaagaactttcttatatatcctcactattgccaaatagg
actgggatgtcattgcaagaagcgtggcagcaatcagatgtcctcagaaaccatgtcaat
tctagcgatctgcataagaaatggtttcaaatagctcttcaattggaaggtttaccgcga
aatgcatcaacacatgcggcgggcgttgtgctatcgccagagccgcttgtcaacattgtc
ccgatagaaaaaggcaatgaaggactctatttaacacaatggccgatgggagatgtagaa
tctgtcggattattaaagatggactttttaggccttcgcaatttaacaatcttagagaga
atacgctctatgattttatataatgaagaacgttttttacagtttgagaaaattccatta
catgattcgaaaacctttgaattactgaaaaatggtgataccaatggcatttttcaatta
gaatcagaaggcatgaagcaagcccttaaagagattaagccaacttccttcaatgatatt
gttgccgtgaatgctttatatcgaccaggccctatggaatttattcctgtctatagtaaa
agaaagcatgggctagaaaaagttgaaatgctgcaccctgtgctagagccgatcttaggt
gaaacatatggtgtcatcgtctatcaagagcaaatattgcaaattgcctcccgtatggcc
ggattctcgatgggagaagctgatctcttacgccgagctgtaagtaaaaaaaagaaggaa
ttgctcgatttagaacaagaacactttgtcacaagtagtattgaacaagggtttgacaga
aaagtagcagaggaagtttatcagctcattgtcaaatttgctaattatggatttccaaag
agccatgcggtagcgtatagtatgatctcatatcaaatggcatatttgaaagctcatttt
ccggcctatttttatgcagccatgctcacatctgctatgggtaatcaagaacgattcaat
aaaattctgcaagaggcgaagcaaaaaggcatcgctattctatcgccatccatcaatcgt
agtggacgttcattttacgtacagaatggatccattcgctatgctctctcagctattaaa
ggtgttccacatccatttttaaacaagctaatagagctgagaagaaatggtcatggaaat
tggcaggatatatttgatttagctttagacttaacagctgtccattttaatcgtaaaacc
gtagagccacttattaaagctggagcgctagatgaattcggcaaggatcgcgctgtactg
ttggctacgattgatgcggctgtgaagcatgcggaattgtatcgaccagatcaagaaaca
acattattagatgatgactccttcttctttggaaagccaaagcacgctaatgcaagccca
atcccagaaaaattaaagctccagtacgagaaagaagtgctcggtacatatatatcgatg
cacccgattcaaaaggtgaagcaggcgcaacatttggtaacaccagcttttgataaccta
aaagggctaacaggaagacattttgtcaaagtggttggtttagtaacagagataaagcaa
attcggacgaaaaaaggcgaattgatggcttttgtacaactagaagacgaaacgggtatc
ctttcgcttaccgtattcccgaaagaatatcttcacgcaatcgaatggctaaaggaagaa
cagattataatggcagagggcaacttggagcaaagaaaagggcaggttcaggtaatctat
aaaaaagggactgtcctttcatcgtaa
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