Rummeliibacillus stabekisii: ATY39_09920
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Entry
ATY39_09920 CDS
T04369
Name
(GenBank) hypothetical protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
rst
Rummeliibacillus stabekisii
Pathway
rst02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rst00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ATY39_09920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rst03000
]
ATY39_09920
Transcription factors [BR:
rst03000
]
Prokaryotic type
Helix-turn-helix
Other families
ATY39_09920
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_8
TPR_12
HTH_3
TPR_2
TRI4_N
DUF6340
HTH_19
RPN7
TPR_6
TPR_7
Motif
Other DBs
NCBI-ProteinID:
AMW99727
UniProt:
A0A143HDA0
LinkDB
All DBs
Position
complement(1992497..1993768)
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AA seq
423 aa
AA seq
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MEKEKYWGKLIKYHRQMQGLKQDDLAIGICTASYLSRIENEVVMADENVYTMLFERLGID
FIAEQKQVKQVNMQLENFYEKLLSNQTLNDLEFNDLVSWQSNELHQTLQLRAKLVYIRYL
LSLDHLKEAEDQLQKIETFISWQQDRDTQMYIGTSTYFYLSTMKYTAILEREDKLHLRHL
LLTTNQFELASYDYHLAFAAHRAYAFQQALTYIERADQSFTHFYKPLFQLKLYSMKGVIL
NALGRYGEAMKEFEAGMNLLSHVQEIQTARQYSSLMNNIAFCFESQGDYERAQQHYQKAN
DYLEDLHTVVNWMRASYRANDFEMLSLLFDRYPQDRFSLGHHLYQWELLSMALHLEEHTL
ERLQDIARRAFIYFDEQNHLELILFYAPLWATFYERLQAYKPASACYRRAFKASEKSRCL
LSH
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagagaaatattgggggaaactcattaaatatcacaggcaaatgcaaggacta
aaacaagatgatttagcgattgggatttgtacagcttcttatttgagccgaatagaaaat
gaagttgtgatggctgacgagaatgtttataccatgttatttgagcgtcttggcattgat
tttatagcagagcaaaaacaagtaaaacaggtgaatatgcaactagagaatttttatgaa
aagcttctttcaaatcaaacattaaacgatctagagtttaatgacttagtatcctggcag
tcgaatgaattgcatcaaacgttgcaattacgcgctaaacttgtctatattcgttatctc
ctttcattagatcatttaaaagaagcggaggaccaattgcaaaagatcgaaacatttatt
tcctggcaacaggacagggatacccaaatgtatattggaacttctacatacttttattta
tcgactatgaaatataccgcgattttagaacgagaagataagctgcatttacgtcattta
ttacttaccacaaatcaatttgaattagctagttatgattaccatttagcattcgccgca
caccgagcttatgcctttcaacaagctttaacgtatattgaaagagcagatcaatcattt
actcatttctacaagccactctttcaattaaagctgtattccatgaaaggtgtaattttg
aatgcacttggccgctatggcgaagcaatgaaagaatttgaggctggtatgaatttgttg
agccatgtacaagaaattcagacagcacgacaatacagctcattaatgaataatattgca
ttctgttttgagagtcagggagattatgagcgtgcccagcaacattaccagaaagccaat
gactatctagaagatttacataccgttgtcaattggatgcgggcgagttatagagcaaat
gattttgagatgcttagcttgctattcgatcgctatccacaagatcgtttttcacttggc
catcatctctatcaatgggagctattatctatggcactgcatctagaagagcatactttg
gagcgactgcaagatatcgcacgacgtgcctttatttattttgatgaacagaatcattta
gagctaatactgttttatgctcccctttgggcaacattttatgagcgtctgcaagcctat
aaacctgcaagtgcttgttatcgcagagcttttaaagcaagtgaaaagtctcgatgttta
ttgagtcattaa
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