Rummeliibacillus stabekisii: ATY39_11945
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Entry
ATY39_11945 CDS
T04369
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rst
Rummeliibacillus stabekisii
Pathway
rst03420
Nucleotide excision repair
rst03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ATY39_11945
03430 Mismatch repair
ATY39_11945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rst03400
]
ATY39_11945
Enzymes [BR:
rst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ATY39_11945
DNA repair and recombination proteins [BR:
rst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ATY39_11945
MMR (mismatch excision repair)
Other MMR factors
ATY39_11945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_12
AAA_30
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AMX00072
UniProt:
A0A143HFP9
LinkDB
All DBs
Position
complement(2396917..2399154)
Genome browser
AA seq
745 aa
AA seq
DB search
MEQLTRNLLSGMNKEQEEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLVIEKQVYPSKIL
AITFTNKAGREMKERINNLLGQGTSERMWVSTFHSMCVRILRRDIDRIGYSKSFTILDTS
DQLTVIKNALKELNIDPKRFDPRSMLNAISSAKNECIDAASYKAQINESNPYERTVAQVY
ENYQKRLRKNQSCDFDDLIMLTIRLFEEVPEVLEYYQNRFQYIHVDEYQDTNKSQYLLVK
MLAKRFKNLCVVGDSDQSIYRWRGADIQNILSFEKDYPNAKVIMLEQNYRSTSRILQAAN
DVIENNTSRYPKKLRTENEDGEKIYLYRSYDEKQEAQFVVKTIQELMETENRSADDFAIL
YRTNAQSRVMEEMLVKSNMNYTIVGGTKFYDRKEIKDLLAYLRLIANNDDDLSLARIINE
PKRSIGATSFERMAQFAIDQDRSIFDALAEADFMGLSARATKAAIEFREMILNLTKMQEF
LPVTELVEEILTKSGYRDMLKNEKTIEAESRLENIDEFISVTKAFEDQSEDKSLVAFLTD
LALIADIDTLDKEDETKGSIVLMTMHSAKGLEFPVVFIIGMEENIFPHSRSLQDDDEMEE
ERRLAYVGITRAEQRLYLTCAQCRTIFGRSSFNTPSRFLQEIGSEILEEIALRDQTNGHT
SFNAPRRRPSGYAQPRQTVITPTYKQTGGDQIGWKAGDKASHKKWGVGTVVAVRGEGENT
ELDIAFASPTGIKRLLAKFAPIDKV
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggaacagctgacaagaaatttgctgagtggcatgaataaagaacaagaagaagcagtt
aaaacaacagaaggccctctcctcatcatggcgggagcaggatcaggaaaaacgagagta
ttaacgcatcgaattgcttatttggtcatcgaaaagcaagtctatccttccaaaatatta
gcgatcaccttcactaataaagcgggccgcgaaatgaaggagcggatcaacaacttgctt
ggccaaggaacaagcgaacggatgtgggtatctacgttccactcaatgtgcgtgcgcata
ttaagacgagatatcgaccgcattggctatagcaagagctttaccatcctcgatacctct
gaccaactgaccgtaattaaaaatgctctaaaagagctaaacatcgatccaaaacgattt
gatccgcgttccatgctgaatgcgattagctctgccaagaacgagtgcattgatgctgcc
tcgtacaaagctcaaatcaatgaatctaacccatatgaacggactgtcgcgcaagtatat
gagaactatcaaaaacgcttgagaaagaatcaatcatgcgacttcgatgatttgattatg
cttacaatccgtctttttgaagaagtacctgaagtcttggaatattatcaaaaccgtttc
caatacattcacgtggacgagtaccaagataccaataaatctcagtacctgttagtcaaa
atgcttgcaaagagatttaaaaatctttgtgttgtaggtgactcagatcaatcaatttat
cgctggcgcggtgctgatattcagaacatcttatcatttgagaaggattatcctaatgcc
aaggttattatgcttgagcaaaattatcgttctacatcgcgcatcttacaggcggctaat
gacgtcatagaaaataatacgagccgttatccgaagaagctccgtacggaaaacgaagat
ggagaaaaaatctatctataccgctcctatgacgaaaagcaggaagcacagttcgtcgtt
aagactattcaagaattgatggagacagagaatcgttctgcagatgattttgctattctt
taccgtacaaatgcccaatcacgggtaatggaagaaatgcttgtcaaatcaaacatgaac
tataccattgtcggcggtacaaagttctatgatcgaaaagaaattaaagacttgcttgcc
tatttgcgtctcatcgccaataatgatgatgatttatcgctcgcacgtattatcaatgag
ccaaaacggagcattggcgctacgtcatttgaacgcatggctcaatttgctattgatcaa
gatcgttccatattcgatgcattggctgaagctgattttatgggtttatctgcacgtgca
acgaaggcagcaatcgaattccgtgagatgatattaaatctgacaaaaatgcaggagttt
ttgccggtcacagaattagtggaagaaatcttaactaaatccggctaccgcgatatgttg
aagaatgaaaaaacaattgaagcggaaagccgtttagaaaacattgatgagtttatatct
gttactaaagcatttgaggatcaaagtgaggacaaatctttggttgccttcttaactgat
ctagcgttaatcgctgatattgacacattggataaagaagatgaaacgaaaggctctatt
gttttgatgacgatgcattcggcgaaagggctagagttcccagtcgtgttcattatcggt
atggaagaaaatatctttccgcattcccgttcattgcaggatgatgatgagatggaggaa
gaaagaaggctcgcttatgtgggtataacaagggctgaacagcgcctttatttaacatgt
gctcaatgccggacaatctttggccgcagcagcttcaatacgccttcacgtttcttgcag
gaaattggctctgaaatactggaagaaatagctttgcgcgatcaaacaaatgggcatact
agctttaatgcgccaagacgccgtccatcgggctatgcacagccacgtcaaactgtgatt
acacctacctataaacaaacaggtggcgatcagattggctggaaggctggcgacaaagcc
tctcataagaaatggggcgtaggcacggtagtagcagtgcgcggagaaggcgaaaatact
gaattggatattgcttttgctagtccaaccggcattaaacggttacttgcaaaatttgcg
ccaatcgataaagtttaa
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