Rummeliibacillus stabekisii: ATY39_12550
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Entry
ATY39_12550 CDS
T04369
Name
(GenBank) RNA polymerase sigma-B factor
KO
K03090
RNA polymerase sigma-B factor
Organism
rst
Rummeliibacillus stabekisii
Brite
KEGG Orthology (KO) [BR:
rst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rst03021
]
ATY39_12550
Transcription machinery [BR:
rst03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ATY39_12550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_37
DUF134
HNF-1_N
HTH_28
PhyR_sigma-like
RE_TdeIII
Sigma70_ECF
HTH_3
GerE
DUF1492
Phage_rep_O
KORA
Motif
Other DBs
NCBI-ProteinID:
AMX00165
UniProt:
A0A143HEK9
LinkDB
All DBs
Position
complement(2526321..2527100)
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AA seq
259 aa
AA seq
DB search
MRKQSPSSSASKEQVLEWIQRFQQTEDDEAQTNLVLHYQYLVESIARKYSNGRSYHDDIV
QVGMLGLLGAIRRFDSSFGRSFEAFAVPTIIGEIKRYLRDKTWDVHVPRRIKELGPKIKA
AVEFLTTETQRSPQVAEIAEYLEVEEDEVLEAMEMSQSYQALSMDRPIDSDGDGSTATLF
DIVGKQDDEYEKTNRRIIVENAMKELSERERQIIQLTYLQQLSQKEAGEMLGISQMHVSR
LQRKAIKKLQQIIVASGGI
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaacaatctccttctagttcggcatcaaaagagcaagtattagaatggatccag
cgttttcaacaaactgaagacgatgaggcgcaaacgaacttagttttgcattatcaatac
ttggttgaatccatcgctagaaagtattctaatgggcgctcttaccatgatgacatagtg
caagtcggcatgttaggcctgcttggtgctattagaaggtttgattcttcctttggtcgt
agttttgaggcttttgcggtaccgacgattatcggtgaaatcaaacgctacttaagagat
aaaacatgggatgtccatgtgccaaggcgtattaaagaacttggccccaaaattaaagca
gctgttgagtttttaacaaccgaaacgcaacgttcaccccaagttgcagaaattgcagaa
tatcttgaagtagaagaagatgaagtgctggaagcgatggaaatgagccaaagctatcaa
gcactttcaatggacaggcctattgattctgatggcgatggtagcactgcaacattattt
gatatagtaggcaagcaggatgatgaatacgaaaagacaaaccgccgcattattgtggaa
aacgcaatgaaggaattgtcggaaagagaacgtcaaattattcagcttacatacctccaa
cagcttagccagaaagaagctggggagatgctgggtatatcccaaatgcatgtctcaaga
ttgcagcgtaaagctatcaagaaactgcagcaaattattgttgcgtcaggtggtatttaa
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