Rummeliibacillus stabekisii: ATY39_13530
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Entry
ATY39_13530 CDS
T04369
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rst
Rummeliibacillus stabekisii
Pathway
rst03420
Nucleotide excision repair
rst03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ATY39_13530
03430 Mismatch repair
ATY39_13530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rst03400
]
ATY39_13530
Enzymes [BR:
rst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ATY39_13530
DNA repair and recombination proteins [BR:
rst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ATY39_13530
MMR (mismatch excision repair)
Other MMR factors
ATY39_13530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C
UvrD_C_2
AAA_22
AAA_30
Lipocalin
Motif
Other DBs
NCBI-ProteinID:
AMX00340
UniProt:
A0A143HFW1
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All DBs
Position
complement(2707286..2708842)
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AA seq
518 aa
AA seq
DB search
MAKKLKPTLVIAGPGAGKTHYIIEKVINKLPLLEPHRFLAVITYTNSATNEIRERLNEKM
VIPPNVFIGTIHSFLVRFILKPFGVVQGVLPEQVVYKDVSIKANDRKEENIIKSNIVKKG
IVPYEKIVSLSSNLLKENKKIRELVSQRLQFLFVDEFQDANSGQFNIFEEVRKASATEMY
FVGDPEQSIMTFQNQGSQIQTLDKRPIYKAINSGTIDKEYLDSNNRSSSTIIDFINNFHT
SIIQQKTNKDNNTNNKVTFISDTYDLREIINSFNSICNDRTICENNPSTRFFLGYRRSTF
KTVENEYGLVQKDDSDSNSIQLLKECSTFICEILNRSRTSIMEDLETDDLAYRQLCFKLV
ESIKSNPFINSSEIISLLKTNFKCDPYKSVHKKVQHNPDHIAEGFINKINLELQYSSSIK
EIKDYHLTIHKSKGLQADAVLVIAKSKNELKKWLEIDKQLRFEDKQDTCRVGYVAFSRAK
ELLCIACLEEIDDELKKNLTLLNVDMIPAMGEKEKQPI
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaaattaaaacctacactagttatcgccggacccggtgctggaaaaactcat
tatataattgaaaaagtgatcaataaactaccattactggagccccatcgattccttgct
gtaattacgtacactaactcggcaactaatgaaattagggaacgcttgaatgaaaaaatg
gttattcctccaaatgtctttattggaactattcatagttttttagttcgttttatactt
aaaccatttggggtggttcaaggtgttttaccagagcaagttgtttataaagatgtgagt
ataaaggccaatgatagaaaagaagaaaacattattaagagtaatatcgttaaaaaagga
atagtaccctatgaaaagattgtgtcattatctagtaatttattaaaagaaaataaaaag
attagagaacttgtttctcaaaggctacaatttttatttgttgatgaatttcaagatgca
aactcaggacagttcaatatttttgaagaggtaagaaaagcatccgcaactgaaatgtat
tttgtaggtgatccagagcaaagtattatgacttttcaaaatcaaggtagtcagatccaa
actttagataagcgaccaatatataaagcgataaacagtggaactattgataaagaatat
ctggatagtaataataggtcaagttctacaattatcgatttcattaataacttccatacc
tcaatcattcaacaaaaaacaaataaagataataataccaataataaagtgactttcatt
tcggacacttatgatttacgggagattataaattcatttaattccatatgtaatgataga
accatatgtgaaaataatccatcaacaagattctttttgggttacagacgcagcacattt
aagacagttgaaaatgaatatggattggttcaaaaagatgatagcgattctaattcaata
caattattaaaagaatgttcaacattcatctgtgaaattttaaatagaagcaggacaagt
ataatggaggacttggaaacagatgatctagcgtatagacaactctgctttaaattagta
gagagcattaaatcaaatccattcataaatagtagtgagataatctcgttgttaaaaaca
aacttcaaatgcgatccgtataagtctgttcataaaaaagtacaacataatccagaccat
attgcagaaggatttattaacaagattaatctcgaactgcaatactctagtagtattaaa
gaaattaaagattatcatcttaccattcacaaatcgaagggattacaggctgatgcggtt
ctagtaattgcaaagagtaaaaatgagttaaaaaaatggctagaaatagacaaacaatta
aggtttgaggacaagcaagatacttgtagagttggatatgtggcatttagccgagcaaaa
gaacttttatgtattgcttgtttagaagaaattgatgatgaattaaaaaagaacttaacc
ctcctaaatgtagatatgattccagcaatgggggaaaaggagaagcaaccaatatga
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