Rummeliibacillus stabekisii: ATY39_14270
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Entry
ATY39_14270 CDS
T04369
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rst
Rummeliibacillus stabekisii
Pathway
rst03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rst00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ATY39_14270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rst03021
]
ATY39_14270
03400 DNA repair and recombination proteins [BR:
rst03400
]
ATY39_14270
Enzymes [BR:
rst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ATY39_14270
Transcription machinery [BR:
rst03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ATY39_14270
DNA repair and recombination proteins [BR:
rst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ATY39_14270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SpoIVA_ATPase
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AMX00473
UniProt:
A0A143HFG6
LinkDB
All DBs
Position
complement(2836818..2837762)
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AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEISNDLKYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDG
VLHEFSTIEGVVEDVASIILNIKKLALKIYSDEEKVIEIDFKGNGAVTAADITHDSDVEV
LNPDLYIATVATNGHLRMRMYAQRGRGYTSADQNKREDLPIGVIPIDSIYTPVSRVNYTV
ENTRVGQSSDYDKLSLDVWTDGSIGPKEAISLGAKILTEHLNIFVGLTDEAKTAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVLELANKSEDDMMKVRNLGRKSLEEVK
YKLEELGLGLREED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattgaaaaaccaaagattgaaaccgttgagatcagcaatgatttaaaatac
ggcaaatttgttgtagaaccacttgaacgtgggtatggaactactttgggtaattcacta
cgtcgtatccttctgtcttctttaccaggagctgctgtaacttcaatccaaattgacggc
gtacttcacgaattctctactattgagggtgttgtagaagatgttgcatcaattattttg
aacattaaaaagctagctttgaaaatctattccgatgaagaaaaagttatcgaaatcgat
tttaaaggtaacggagcagtaactgctgctgatattactcatgacagtgatgtagaagta
ttgaacccagatctatacattgcaacggttgctactaacggccatcttcgtatgcgtatg
tatgcgcaacgcggacgtggatatacttcagctgatcaaaacaaacgtgaggatcttcct
atcggcgtgatcccgatcgactctatttacactccagtttcacgcgtcaactatacagtt
gaaaatactcgtgttggacaatcatctgattacgacaaactttcacttgatgtgtggaca
gatggcagcatcggtccaaaagaggcgatttcgctcggagctaaaattttaaccgagcat
ttaaacatcttcgttggtttaacggatgaagcaaaaactgctgaaatcatggttgaaaaa
gaagaagaccaaaaagaaaaagttttagagatgacgattgaagaacttgatctttctgtc
cgttcttacaactgcctaaaacgtgctggcattaatactgtcttagaacttgctaacaag
tctgaagacgatatgatgaaagttcgtaacttaggacgtaaatcattagaagaagttaaa
tacaagttagaagagcttggtttaggattacgagaagaagactaa
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