Rummeliibacillus stabekisii: ATY39_14430
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Entry
ATY39_14430 CDS
T04369
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
rst
Rummeliibacillus stabekisii
Pathway
rst03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rst00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ATY39_14430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rst03021
]
ATY39_14430
03400 DNA repair and recombination proteins [BR:
rst03400
]
ATY39_14430
Enzymes [BR:
rst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ATY39_14430
Transcription machinery [BR:
rst03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ATY39_14430
DNA repair and recombination proteins [BR:
rst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ATY39_14430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
PaaX
Motif
Other DBs
NCBI-ProteinID:
AMX00505
UniProt:
A0A143HFL1
LinkDB
All DBs
Position
complement(2855867..2859469)
Genome browser
AA seq
1200 aa
AA seq
DB search
MIDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLILDM
SPRSLEEVIYFASYVVIEAADTPLEKKQLLSEKEYRAYREKYGKTFVASMGAEAIQQLLS
EIDLDKETEALKEELKTAQGQRRTRAIKRLEVVESFRHSGNRPEWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPGIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPSLKMYQCGLPKG
MAIELFKPFVMKELVERGLAHNIKSAKRKIERMHPEIWDVLEEIMKEHPVLLNRAPTLHR
LGIQAFEPTLIEGKAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERKGAIGEGSVFYGPEELNIAYQNNEVHLHSRIAIK
ASSLNNKTFTEEQNNMLLLTTAGKVFFNEILDNSFPYINEPTNTNLHDATPDKYFIPTST
DVKEHIASQELVKPFTKKYLGNVIAEVFARYHITETSVMLDRMKDLGFKYSTKAGISIGI
SDIIVLPGKHEILHKAQEQVDKVMKQFRRGLITEEERYDRVISFWSAAKDEIQSKLMDSL
PAENPIFMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREDDCGTDRGLAISALKEGTEIIETLE
ERMIGRYAKKTIRHPETNEVLVARDELITAELARLIEEVGIEEVTIRSAFTCNTKHGVCK
KCYGMNLATGDKVEVGEAVGIIAAQSIGEPGTQLTMRTFHQGGVAGADITQGLPRIQEIF
EARNPKGQAVITEIAGVVTEIEEIREGQKEITVQGKVETRKYLAPYNARLKVQLNENVYH
GQILTEGSIDPKELLKVTDVSSVEEYLLKEVQKVYRMQGVEIGDKHVEVMVRQMLRKVRV
IEAGETDLLPGTLLDVHQFAEANAEAIVEGKIPATCRPVILGITKASLETESFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVILGKLVPAGTGMQRYRQIKMADNETDEQEETLAVD
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
ttgatagacgttaataattttgaatacatgaagattggtctagcttcgcccgataaaatc
cgttcatggtcttatggagaagtcaaaaaaccagaaactattaactatcgaacacttaaa
ccagaaaaagacggtttgttctgtgaacgtatctttggaccgacaaaggactgggaatgt
cattgcgggaaatacaaacgtgtacgttacaaaggtgttgtttgtgaccgttgtggagta
gaagtaactcgtgctaaagtacgtcgcgaacgtatggggcatatcgaattagctgctcct
gtctcacacatctggtacttcaagggaatcccgagccgtatgggacttatcctagatatg
tcaccacgctcacttgaagaagtaatctattttgcatcatatgttgtaattgaagcagca
gatacaccacttgaaaagaaacaattgctttcagaaaaagaataccgtgcgtaccgcgaa
aaatacggcaaaactttcgtagcttcaatgggtgctgaagcaattcaacaattattatca
gaaattgatcttgataaagaaacagaagcattaaaagaagaacttaaaacagcacaaggc
caacgccgtacaagagcaatcaaacgtcttgaagtggtagaatcattccgccattccggc
aaccgtcctgaatggatgattctagatgtgctacctgtaatcccacctgaattgcgccca
atggtacaactagatggtggacggttcgctacatcagatttaaatgacttatatcgtcgt
gtaattaaccgtaacaaccgtttgaaacgccttcttgatctaggcgcgcctggcattatt
gttcaaaacgaaaaacgtatgctgcaagaggctgtcgatgcacttatagacaatggccgt
cgtggccgtcctgttacaggacctggtaaccgtccattaaaatctttatctcatatgtta
aaagggaaacaagggcgtttccgtcaaaacttattgggtaaacgtgttgactactctggc
cgttctgtaatcgttgtaggtccatctttgaaaatgtatcaatgtggtcttccaaaaggt
atggcaatcgaattgttcaagcctttcgtaatgaaagaattagtagaacgcggtcttgcg
cataatattaaatctgcaaaacgaaaaattgaacgtatgcacccagaaatctgggatgtt
ctagaagaaatcatgaaagagcatccagtacttctaaaccgtgctcctactcttcacaga
cttggtattcaagcatttgaaccaactcttatcgaagggaaggctatccgtcttcatcca
ttagtatgtacagcttacaacgctgacttcgatggtgaccaaatggcggttcacgttcca
ctttctgcagaagcacaagcggaagctcgtttattaatgcttgcagctcaaaacattcta
aatccaaaagacggtaaaccagttgttacgccatctcaagatatggtattagggaactat
tacttaacacttgaaagaaaaggcgctattggtgaaggttctgtcttctatggaccagaa
gaattaaatattgcttatcaaaataacgaagtgcacttgcactcacgtattgcaattaaa
gcatcttctttaaacaataagacatttacagaagaacaaaacaatatgttgttgcttaca
actgctgggaaagttttcttcaatgaaatcttggataattcattcccatatatcaatgaa
ccaacaaatacaaacttgcatgatgcaacaccagacaaatactttattcctacgtcaaca
gatgtgaaggaacatatcgcttcacaagaacttgttaagccgtttacgaagaagtattta
ggtaatgttattgcagaagtatttgctagataccatattactgaaacatccgtaatgctt
gaccgtatgaaagatcttggcttcaagtattctactaaagccggtatttcaattggtatt
tccgatatcatcgtattaccagggaaacacgagatcttgcataaagcgcaagagcaagtg
gataaagtgatgaaacaattccgtcgcggtttaattacagaagaagaacgctacgatcgc
gttatttctttctggagtgctgctaaagacgaaattcaatcaaaactgatggattccctt
ccagcagagaacccaatctttatgatgagtgactctggtgcccgtggtaacgcatctaac
tttactcagcttgctggtatgcgtggtttgatggccaacccggccggacgtattatcgaa
cttccaattaaatcatcattccgtgaaggtttaacagtactcgagtacttcatctctacg
catggtgcacgtaaaggtcttgctgatacagcgctgaaaacagccgattcaggttacctt
actcgccgtctagttgacgttgcacaagatgttattgttcgtgaagatgattgcggtaca
gatagaggtttagcaatctctgctttgaaagaaggcacagagattattgaaactctagaa
gagcgtatgatcggacgttatgcgaagaaaacaattcgccacccagaaacaaacgaagtc
cttgtagcacgcgacgaattgattacagctgaacttgctcgtctaattgaagaagtgggc
attgaagaggtaacaatccgttctgccttcacatgtaataccaaacatggtgtatgtaaa
aaatgttacggcatgaacttagcgacaggcgataaagttgaagttggtgaggcagttggt
atcatcgctgcacaatcaatcggtgaacctggtacacagttaacaatgcgtacattccac
caaggtggggtagccggtgccgatattacacaaggtcttccacgtatccaagaaatattc
gaagcacgtaatccaaaaggtcaagcggtcattactgaaatcgctggtgttgtaacagag
atcgaagaaattcgcgaaggccaaaaagaaattacggtccaaggaaaagttgaaacacgt
aaatatttagcaccatataatgcacgtctaaaagttcaattgaacgaaaatgtgtatcat
ggtcaaatattaacagagggttcaattgatccgaaagaattacttaaagttacagatgtt
tcttcagtagaagaatacctattaaaagaagtccaaaaagtatatcgtatgcaaggggta
gaaattggtgataaacacgtagaggtaatggttcgccaaatgcttcgcaaagtacgtgtt
attgaagcgggagaaacagacttacttcctggtacattgctagatgtgcaccaatttgca
gaagcaaatgctgaagctattgttgaaggtaagattccagctacatgccgacctgtcatc
ttgggtattacaaaagcttctcttgaaacagaatcattcttatctgcagcttcattccaa
gaaacaactcgcgtattaacagatgcagctatcaaaggtaaacgcgacgaattacttggt
ctgaaagaaaatgttatcttaggtaaacttgttccagctggtacaggtatgcaacgttac
cgtcaaattaaaatggctgataacgaaacagatgaacaagaagaaacacttgcggtagat
taa
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